RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CLDND1Q9NY35 253 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 DTLQ9NZJ0 730 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 STAP2Q9UGK3 403 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 PCDHGB6Q9Y5F9 930 aa4.22□□□□□ -1.73
SF3B1-205ENST00000424674 MROH6A6NGR9 719 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 CBX4O00257 560 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 EIF3FO00303 357 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-205ENST00000424674 HTATSF1O43719 755 aaKnown RBP4.21□□□□□ -1.74
SF3B1-205ENST00000424674 MGEA5O60502 916 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 TUSC2O75896 110 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 CSTBP04080 98 aaKnown RBP4.21□□□□□ -1.74
SF3B1-205ENST00000424674 ITGB3P05106 788 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 ATP6V1B1P15313 513 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 XBP1P17861 261 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 DEKP35659 375 aaKnown RBP4.21□□□□□ -1.74
SF3B1-205ENST00000424674 TECP42680 631 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 ZNF132P52740 706 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 BPIFB3P59826 476 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 KIAA2012Q0VF49 1180 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 MAP4K2Q12851 820 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 ADAM9Q13443 819 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 ZNF267Q14586 743 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-205ENST00000424674 SLC45A4Q5BKX6 768 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 ATAT1Q5SQI0 421 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 GPATCH4Q5T3I0 446 aaKnown RBP4.21□□□□□ -1.74
SF3B1-205ENST00000424674 CFAP58Q5T655 872 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 IZUMO3Q5VZ72 239 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 STEAP3Q658P3 488 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 PLBD1Q6P4A8 553 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 BORAQ6PGQ7 559 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 CATSPER4Q7RTX7 472 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 SDCCAG8Q86SQ7 713 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-205ENST00000424674 GGNQ86UU5 652 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 FAM124AQ86V42 546 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 ARHGEF25Q86VW2 580 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 LGI4Q8N135 537 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 CCAR2Q8N163 923 aaKnown RBP4.21□□□□□ -1.74
SF3B1-205ENST00000424674 MIER2Q8N344 545 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 OR8H1Q8NGG4 311 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 ADAMTS18Q8TE60 1221 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 KCTD13Q8WZ19 329 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 HPS3Q969F9 1004 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 TOE1Q96GM8 510 aaKnown RBP4.21□□□□□ -1.74
SF3B1-205ENST00000424674 TEKT5Q96M29 485 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 ADPGKQ9BRR6 497 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 JAM3Q9BX67 310 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 TMEM120AQ9BXJ8 343 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 ABCG4Q9H172 646 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 EPB41L1Q9H4G0 881 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 IRAK4Q9NWZ3 460 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 SAMD15Q9P1V8 674 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 GIMAP2Q9UG22 337 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 CDC23Q9UJX2 597 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 GPR34Q9UPC5 381 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 POLHQ9Y253 713 aa4.21□□□□□ -1.74
SF3B1-205ENST00000424674 GPRASP1Q5JY77 1395 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 TCRBV5S2A0A599 114 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 GOLGA6L22H0YM25 854 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 H3BML4 177 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 ADAMTS3O15072 1205 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 PCDHGA12O60330 932 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 DGKIO75912 1065 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 TBX18O95935 607 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 PARP1P09874 1014 aaKnown RBP4.2□□□□□ -1.74
SF3B1-205ENST00000424674 ABCB4P21439 1286 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 MUTP22033 750 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 TNFSF4P23510 183 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 PEX2P28328 305 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 ATP6V1E1P36543 226 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 MAGEA10P43363 369 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-205ENST00000424674 TNNT2P45379 298 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-205ENST00000424674 KPNA1P52294 538 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-205ENST00000424674 TPD52P55327 224 aaPredicted RBP4.2□□□□□ -1.74
SF3B1-205ENST00000424674 PRKG1Q13976 671 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 ACAP2Q15057 778 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 LLGL1Q15334 1064 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 PTPN14Q15678 1187 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 NTRK3Q16288 839 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 DDB1Q16531 1140 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 MEA1Q16626 185 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 ANO4Q32M45 955 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 PARP10Q53GL7 1025 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 CCDC30Q5VVM6 783 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 PRAMEF18Q5VWM3 479 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 MCTP2Q6DN12 878 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 TEPPQ6URK8 271 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 ENOSF1Q7L5Y1 443 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 OVCH2Q7RTZ1 564 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 DENND1CQ8IV53 801 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 RBM12BQ8IXT5 1001 aaKnown RBP4.2□□□□□ -1.74
SF3B1-205ENST00000424674 TEX11Q8IYF3 940 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 CEP57L1Q8IYX8 460 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 NXPE1Q8N323 547 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 TXNDC5Q8NBS9 432 aaKnown RBP4.2□□□□□ -1.74
SF3B1-205ENST00000424674 CLRN3Q8NCR9 226 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 ARRDC4Q8NCT1 418 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 SSH1Q8WYL5 1049 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 SLC5A5Q92911 643 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 ATP2A3Q93084 1043 aa4.2□□□□□ -1.74
SF3B1-205ENST00000424674 CENPTQ96BT3 561 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms