RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PLEKHG4Q58EX7 1191 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 PARD3BQ8TEW8 1205 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 C18orf25Q96B23 403 aaPredicted RBP14.59□□□□□ -0.07
PRPF39-202ENST00000424478 MTMR12Q9C0I1 747 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 NDST4Q9H3R1 872 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 EVI5O60447 810 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 ACTN1P12814 892 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 EEF1GP26641 437 aaKnown RBP14.59□□□□□ -0.07
PRPF39-202ENST00000424478 RBL2Q08999 1139 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 LRMPQ12912 555 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 VWA3BQ502W6 1294 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 JADE1Q6IE81 842 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 KCNN1Q92952 543 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 GAD1Q99259 594 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 PI4K2AQ9BTU6 479 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 RPF1Q9H9Y2 349 aaKnown RBP14.59□□□□□ -0.07
PRPF39-202ENST00000424478 KRT13P13646 458 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 ZNF75DP51815 510 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 DSC3Q14574 896 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 ACAP3Q96P50 834 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 PDE4DIPQ5VU43 2346 aa14.59□□□□□ -0.07
PRPF39-202ENST00000424478 EYSQ5T1H1 3165 aa14.58□□□□□ -0.08
PRPF39-202ENST00000424478 FGFR1OPO95684 399 aaKnown RBP14.58□□□□□ -0.08
PRPF39-202ENST00000424478 NFIL3Q16649 462 aa14.58□□□□□ -0.08
PRPF39-202ENST00000424478 AGMOQ6ZNB7 445 aa14.58□□□□□ -0.08
PRPF39-202ENST00000424478 FRMD5Q7Z6J6 570 aa14.58□□□□□ -0.08
PRPF39-202ENST00000424478 FAM114A1Q8IWE2 563 aa14.58□□□□□ -0.08
PRPF39-202ENST00000424478 MFSD14AQ96MC6 490 aa14.58□□□□□ -0.08
PRPF39-202ENST00000424478 MIOSQ9NXC5 875 aa14.58□□□□□ -0.08
PRPF39-202ENST00000424478 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.58□□□□□ -0.08
PRPF39-202ENST00000424478 SLC16A3O15427 465 aaKnown RBP14.58□□□□□ -0.08
PRPF39-202ENST00000424478 CAND2O75155 1236 aa14.58□□□□□ -0.08
PRPF39-202ENST00000424478 POMCP01189 267 aa14.58□□□□□ -0.08
PRPF39-202ENST00000424478 ABCD1P33897 745 aa14.58□□□□□ -0.08
PRPF39-202ENST00000424478 MAN2A1Q16706 1144 aa14.58□□□□□ -0.08
PRPF39-202ENST00000424478 GJB7Q6PEY0 223 aa14.58□□□□□ -0.08
PRPF39-202ENST00000424478 C16orf59Q7L2K0 433 aa14.58□□□□□ -0.08
PRPF39-202ENST00000424478 BRSK2Q8IWQ3 736 aa14.58□□□□□ -0.08
PRPF39-202ENST00000424478 FNBP1Q96RU3 617 aa14.58□□□□□ -0.08
PRPF39-202ENST00000424478 TUBGCP4Q9UGJ1 667 aa14.58□□□□□ -0.08
PRPF39-202ENST00000424478 FAM170AA1A519 330 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 EPHB6O15197 1021 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 SLC9A1P19634 815 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 CDR1P51861 262 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 CPLX3Q8WVH0 158 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 CCDC94Q9BW85 323 aaPredicted RBP14.57□□□□□ -0.08
PRPF39-202ENST00000424478 RTN4Q9NQC3 1192 aaKnown RBP14.57□□□□□ -0.08
PRPF39-202ENST00000424478 CGNQ9P2M7 1197 aaKnown RBP14.57□□□□□ -0.08
PRPF39-202ENST00000424478 A0A1B0GTH6 734 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 ENPP3O14638 875 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 KIAA0355O15063 1070 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 SYCP1Q15431 976 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 INTS8Q75QN2 995 aaKnown RBP14.57□□□□□ -0.08
PRPF39-202ENST00000424478 PCMTD1Q96MG8 357 aaPredicted RBP14.57□□□□□ -0.08
PRPF39-202ENST00000424478 SEZ6LQ9BYH1 1024 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 TMEM117Q9H0C3 514 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 FAM207AQ9NSI2 230 aaPredicted RBP14.57□□□□□ -0.08
PRPF39-202ENST00000424478 PRKAG2Q9UGJ0 569 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 PPEF2O14830 753 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 CLTAP09496 248 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 AXLP30530 894 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 GRM5P41594 1212 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 SCNN1GP51170 649 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 DEFB103AP81534 67 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 BIRC3Q13489 604 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 NR1I3Q14994 352 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 DCAF4L1Q3SXM0 396 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 SPOPLQ6IQ16 392 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 ANKRD20A12PQ8NF67 263 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 TAS1R2Q8TE23 839 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 SEPT8Q92599 483 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 SEMA4DQ92854 862 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 KIF12Q96FN5 646 aa14.57□□□□□ -0.08
PRPF39-202ENST00000424478 LGALS16A8MUM7 142 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 AFPP02771 609 aaKnown RBP14.56□□□□□ -0.08
PRPF39-202ENST00000424478 ITGA4P13612 1032 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 UVSSAQ2YD98 709 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 TDRD10Q5VZ19 366 aaKnown RBP14.56□□□□□ -0.08
PRPF39-202ENST00000424478 SV2AQ7L0J3 742 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 DRC7Q8IY82 874 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 HELQQ8TDG4 1101 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 MKNK1Q9BUB5 465 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 A0A0U1RQF3 1178 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 TTC26A0AVF1 554 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 C9IYK1 514 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 F8W810 466 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 GNA14O95837 355 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 LDHAP00338 332 aaKnown RBP14.56□□□□□ -0.08
PRPF39-202ENST00000424478 CST3P01034 146 aaPredicted RBP14.56□□□□□ -0.08
PRPF39-202ENST00000424478 RPLP2P05387 115 aaKnown RBP14.56□□□□□ -0.08
PRPF39-202ENST00000424478 KRT19P08727 400 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 SCP2P22307 547 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 FMO5P49326 533 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 MARSP56192 900 aaKnown RBP14.56□□□□□ -0.08
PRPF39-202ENST00000424478 SNRPFP62306 86 aaKnown RBP14.56□□□□□ -0.08
PRPF39-202ENST00000424478 SOX4Q06945 474 aaPredicted RBP14.56□□□□□ -0.08
PRPF39-202ENST00000424478 KCNMA1Q12791 1236 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 ARID5BQ14865 1188 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 PSMD6Q15008 389 aa14.56□□□□□ -0.08
PRPF39-202ENST00000424478 PAN2Q504Q3 1202 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms