RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 ADSSL1Q8N142 457 aa14.6□□□□□ -0.07
SREBF2-202ENST00000424354 CDC26Q8NHZ8 85 aa14.6□□□□□ -0.07
SREBF2-202ENST00000424354 GRAPLQ8TC17 118 aaPredicted RBP14.6□□□□□ -0.07
SREBF2-202ENST00000424354 TSSK1BQ9BXA7 367 aa14.6□□□□□ -0.07
SREBF2-202ENST00000424354 SLC40A1Q9NP59 571 aa14.6□□□□□ -0.07
SREBF2-202ENST00000424354 BFARQ9NZS9 450 aa14.6□□□□□ -0.07
SREBF2-202ENST00000424354 PAIP2BQ9ULR5 123 aaKnown RBP14.6□□□□□ -0.07
SREBF2-202ENST00000424354 LRP6O75581 1613 aa14.6□□□□□ -0.07
SREBF2-202ENST00000424354 CLDN3O15551 220 aa14.6□□□□□ -0.07
SREBF2-202ENST00000424354 EXOSC10Q01780 885 aaKnown RBP14.6□□□□□ -0.07
SREBF2-202ENST00000424354 TMCO5AQ8N6Q1 288 aa14.6□□□□□ -0.07
SREBF2-202ENST00000424354 SPDYE1Q8NFV5 336 aaPredicted RBP14.6□□□□□ -0.07
SREBF2-202ENST00000424354 TEX12Q9BXU0 123 aa14.6□□□□□ -0.07
SREBF2-202ENST00000424354 CCSER1Q9C0I3 900 aa14.6□□□□□ -0.07
SREBF2-202ENST00000424354 PKD2L2Q9NZM6 624 aa14.6□□□□□ -0.07
SREBF2-202ENST00000424354 KIF17Q9P2E2 1029 aa14.6□□□□□ -0.07
SREBF2-202ENST00000424354 ZBTB12Q9Y330 459 aaPredicted RBP14.6□□□□□ -0.07
SREBF2-202ENST00000424354 hCG_2014768A0A024R1R8 64 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 A0A1W2PQJ5 194 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 FAM47DPA6NHR8 397 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 TYK2P29597 1187 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 DPYDQ12882 1025 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 INPP5AQ14642 412 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 PTGISQ16647 500 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 ABI1Q8IZP0 508 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 OR6B3Q8NGW1 331 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 DACH2Q96NX9 599 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 KCNK16Q96T55 309 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 UVRAGQ9P2Y5 699 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 USP42Q9H9J4 1324 aaKnown RBP14.59□□□□□ -0.07
SREBF2-202ENST00000424354 MARK3P27448 753 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 CIITAP33076 1130 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 BCAR1P56945 870 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 PSMC1P62191 440 aaKnown RBP14.59□□□□□ -0.07
SREBF2-202ENST00000424354 LRRC8EQ6NSJ5 796 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 KIRREL3Q8IZU9 778 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 FAM167AQ96KS9 214 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 EML4Q9HC35 981 aaKnown RBP14.59□□□□□ -0.07
SREBF2-202ENST00000424354 ANP32DO95626 131 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 FMR1Q06787 632 aaKnown RBP eCLIP14.59□□□□□ -0.071e-6■■■□□ 14.9
SREBF2-202ENST00000424354 ZNF746Q6NUN9 644 aaPredicted RBP14.59□□□□□ -0.07
SREBF2-202ENST00000424354 LINC00116Q8NCU8 138 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 TBC1D23Q9NUY8 699 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.59□□□□□ -0.07
SREBF2-202ENST00000424354 ENO1P06733 434 aaKnown RBP14.59□□□□□ -0.07
SREBF2-202ENST00000424354 HNRNPH1P31943 449 aaKnown RBP14.59□□□□□ -0.07
SREBF2-202ENST00000424354 CAPRIN1Q14444 709 aaKnown RBP14.59□□□□□ -0.07
SREBF2-202ENST00000424354 MRGBPQ9NV56 204 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 IRAK4Q9NWZ3 460 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 CHCHD3Q9NX63 227 aaKnown RBP14.59□□□□□ -0.07
SREBF2-202ENST00000424354 SATB2Q9UPW6 733 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 INPP5FQ9Y2H2 1132 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 MYCP01106 439 aaPredicted RBP14.59□□□□□ -0.07
SREBF2-202ENST00000424354 FCER1AP12319 257 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 RWDD4Q6NW29 188 aaKnown RBP14.59□□□□□ -0.07
SREBF2-202ENST00000424354 RIBC1Q8N443 379 aaPredicted RBP14.59□□□□□ -0.07
SREBF2-202ENST00000424354 MS4A14Q96JA4 679 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 ZIM3Q96PE6 472 aa14.59□□□□□ -0.07
SREBF2-202ENST00000424354 PSMC3IPQ9P2W1 217 aaPredicted RBP14.59□□□□□ -0.07
SREBF2-202ENST00000424354 MTO1Q9Y2Z2 717 aaKnown RBP14.59□□□□□ -0.07
SREBF2-202ENST00000424354 EIF2AK2P19525 551 aaKnown RBP14.58□□□□□ -0.07
SREBF2-202ENST00000424354 IREB2P48200 963 aaKnown RBP14.58□□□□□ -0.07
SREBF2-202ENST00000424354 MAP3K10Q02779 954 aa14.58□□□□□ -0.07
SREBF2-202ENST00000424354 HABP4Q5JVS0 413 aaKnown RBP14.58□□□□□ -0.07
SREBF2-202ENST00000424354 FAM129AQ9BZQ8 928 aa14.58□□□□□ -0.07
SREBF2-202ENST00000424354 ISCUQ9H1K1 167 aa14.58□□□□□ -0.07
SREBF2-202ENST00000424354 DAB1O75553 588 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 SRGAP2CP0DJJ0 459 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 KRT76Q01546 638 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 PDIA5Q14554 519 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 CEP55Q53EZ4 464 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 ZNF394Q53GI3 561 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 RAD9BQ6WBX8 426 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 ELOA2Q8IYF1 753 aaPredicted RBP14.58□□□□□ -0.08
SREBF2-202ENST00000424354 RAPGEF5Q92565 580 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 FAM213AQ9BRX8 229 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 MOV10L1Q9BXT6 1211 aaKnown RBP14.58□□□□□ -0.08
SREBF2-202ENST00000424354 CCDC134Q9H6E4 229 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 RBM12Q9NTZ6 932 aaKnown RBP14.58□□□□□ -0.08
SREBF2-202ENST00000424354 ZHX2Q9Y6X8 837 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 H0Y626 953 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 TRIM16O95361 564 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 TRPC1P48995 793 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 FXR1P51114 621 aaKnown RBP eCLIP14.58□□□□□ -0.087e-8■■■■□ 24.1
SREBF2-202ENST00000424354 AP3M2P53677 418 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 MTMR1Q13613 665 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 TRADDQ15628 312 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 ANGPTL8Q6UXH0 198 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 CMTM5Q96DZ9 223 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 SLC26A4O43511 780 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 ALDH18A1P54886 795 aaKnown RBP14.58□□□□□ -0.08
SREBF2-202ENST00000424354 KDSRQ06136 332 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 CIAPIN1Q6FI81 312 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 RHPN2Q8IUC4 686 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 RCOR2Q8IZ40 523 aa14.58□□□□□ -0.08
SREBF2-202ENST00000424354 IQCA1LA6NCM1 817 aa14.57□□□□□ -0.08
SREBF2-202ENST00000424354 ENO4A6NNW6 628 aa14.57□□□□□ -0.08
SREBF2-202ENST00000424354 PP2D1A8MPX8 630 aa14.57□□□□□ -0.08
SREBF2-202ENST00000424354 ESRRBO95718 433 aa14.57□□□□□ -0.08
SREBF2-202ENST00000424354 SFNP31947 248 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms