RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 CCDC183Q5T5S1 534 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 CDCA2Q69YH5 1023 aaPredicted RBP7.72□□□□□ -1.17
EPHA4-206ENST00000424339 RUFY4Q6ZNE9 571 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 LRRC8DQ7L1W4 858 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 DYMQ7RTS9 669 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 DAW1Q8N136 415 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 TMEM199Q8N511 208 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 MYCT1Q8N699 235 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 RNF149Q8NC42 400 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 APBB2Q92870 758 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 POM121Q96HA1 1249 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 SH2D3AQ9BRG2 576 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 FTHL17Q9BXU8 183 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 ZHX3Q9H4I2 956 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 RRAGDQ9NQL2 400 aaPredicted RBP7.72□□□□□ -1.17
EPHA4-206ENST00000424339 KMT5AQ9NQR1 393 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 NDFIP2Q9NV92 336 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 PRMT7Q9NVM4 692 aaPredicted RBP7.72□□□□□ -1.17
EPHA4-206ENST00000424339 ARHGAP28Q9P2N2 729 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 EXOC7Q9UPT5 735 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 BRCA2P51587 3418 aa7.72□□□□□ -1.17
EPHA4-206ENST00000424339 A0A087WWV3 80 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 CCDC169A6NNP5 214 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 K7ERI5 159 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 GPR32O75388 356 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 ERLIN2O94905 339 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 VTNP04004 478 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 IQCF3P0C7M6 154 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 DARSP14868 501 aaKnown RBP7.71□□□□□ -1.18
EPHA4-206ENST00000424339 RAG1P15918 1043 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 ADH6P28332 368 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 SARSP49591 514 aaKnown RBP7.71□□□□□ -1.18
EPHA4-206ENST00000424339 RGS19P49795 217 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 NCKAP1LP55160 1127 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 PEX3P56589 373 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 SNRPFP62306 86 aaKnown RBP7.71□□□□□ -1.18
EPHA4-206ENST00000424339 EHHADHQ08426 723 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 MGAT3Q09327 533 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 STRN3Q13033 797 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 COASYQ13057 564 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 STIM1Q13586 685 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 CUL4BQ13620 913 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 CAPSQ13938 189 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 COBLL1Q53SF7 1204 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 CT47A1Q5JQC4 288 aaPredicted RBP7.71□□□□□ -1.18
EPHA4-206ENST00000424339 FIGNL1Q6PIW4 674 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 RBM43Q6ZSC3 357 aaKnown RBP7.71□□□□□ -1.18
EPHA4-206ENST00000424339 TSHZ1Q6ZSZ6 1077 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 MAEAQ7L5Y9 396 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 SFR1Q86XK3 245 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 RPUSD2Q8IZ73 545 aaKnown RBP7.71□□□□□ -1.18
EPHA4-206ENST00000424339 GPT2Q8TD30 523 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 RSPH1Q8WYR4 309 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 DHX38Q92620 1227 aaKnown RBP7.71□□□□□ -1.18
EPHA4-206ENST00000424339 CCDC51Q96ER9 411 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 NLRP4Q96MN2 994 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 ADAMTS10Q9H324 1103 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 TMEM206Q9H813 350 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 MRPL44Q9H9J2 332 aaKnown RBP7.71□□□□□ -1.18
EPHA4-206ENST00000424339 IFT122Q9HBG6 1241 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 GPRC5CQ9NQ84 441 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 CHST12Q9NRB3 414 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 TPSG1Q9NRR2 321 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 CGNQ9P2M7 1197 aaKnown RBP7.71□□□□□ -1.18
EPHA4-206ENST00000424339 CDY2AQ9Y6F7 541 aa7.71□□□□□ -1.18
EPHA4-206ENST00000424339 ALPK3Q96L96 1907 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 A0A087WZ62 844 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 INO80B-WBP1J3KQ70 363 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 K7ENM7 598 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 ACKR2O00590 384 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 KIAA0391O15091 583 aaKnown RBP7.7□□□□□ -1.18
EPHA4-206ENST00000424339 DYRK3O43781 588 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 KLRC4O43908 158 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 RPS6KA5O75582 802 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 IL2RAP01589 272 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 CHRNA1P02708 482 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 CXCL10P02778 98 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 SRGAP2CP0DJJ0 459 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 SKIP12755 728 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 MCCD1P59942 119 aaPredicted RBP7.7□□□□□ -1.18
EPHA4-206ENST00000424339 GTF2BQ00403 316 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 RAD51AP2Q09MP3 1159 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 PAK2Q13177 524 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 PPIGQ13427 754 aaKnown RBP eCLIP7.7□□□□□ -1.18
EPHA4-206ENST00000424339 DRP2Q13474 957 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 PNOCQ13519 176 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 KIZQ2M2Z5 673 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 C4orf17Q53FE4 359 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 FBXO47Q5MNV8 452 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 ZNF618Q5T7W0 954 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 ZNF658Q5TYW1 1059 aaPredicted RBP7.7□□□□□ -1.18
EPHA4-206ENST00000424339 MFSD5Q6N075 450 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 FOXR2Q6PJQ5 311 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 ZPBP2Q6X784 338 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 ZNF720Q7Z2F6 126 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 HAUS6Q7Z4H7 955 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 TMEM161BQ8NDZ6 487 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 GOLGA5Q8TBA6 731 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 ASAP3Q8TDY4 903 aa7.7□□□□□ -1.18
EPHA4-206ENST00000424339 SEPT8Q92599 483 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms