RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 NELL1Q92832 810 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 RPGRQ92834 1020 aaKnown RBP3.3□□□□□ -1.88
PMS1-209ENST00000424059 TSR2Q969E8 191 aaKnown RBP3.3□□□□□ -1.88
PMS1-209ENST00000424059 SCLYQ96I15 445 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 SERINC2Q96SA4 455 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 TCF25Q9BQ70 676 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 HAPLN2Q9GZV7 340 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 VPS33BQ9H267 617 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 VEZTQ9HBM0 779 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 POLR3BQ9NW08 1133 aaPredicted RBP3.3□□□□□ -1.88
PMS1-209ENST00000424059 ETAA1Q9NY74 926 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 SNTG2Q9NY99 539 aa3.3□□□□□ -1.88
PMS1-209ENST00000424059 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.3□□□□□ -1.88
PMS1-209ENST00000424059 XPO7Q9UIA9 1087 aaKnown RBP3.3□□□□□ -1.88
PMS1-209ENST00000424059 REXO2Q9Y3B8 237 aaKnown RBP3.3□□□□□ -1.88
PMS1-209ENST00000424059 MRPL42Q9Y6G3 142 aaKnown RBP3.3□□□□□ -1.88
PMS1-209ENST00000424059 UBA6A0AVT1 1052 aaPredicted RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 CCDC85CA6NKD9 419 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 FAM25EA8MYX2 175 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 FOXN1O15353 648 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 RHOBTB3O94955 611 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 JUNP05412 331 aaKnown RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 MYBL2P10244 700 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 BPIFB4P59827 614 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 NSUN2Q08J23 767 aaKnown RBP eCLIP3.29□□□□□ -1.88
PMS1-209ENST00000424059 TRAF1Q13077 416 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 EIF2B5Q13144 721 aaKnown RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 TCIRG1Q13488 830 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 RAPGEF1Q13905 1077 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 TOB2Q14106 344 aaPredicted RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 TRIM29Q14134 588 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 TOMM20Q15388 145 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 MAN2A1Q16706 1144 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 KRTAP15-1Q3LI76 137 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 FILIP1LQ4L180 1135 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 PARP10Q53GL7 1025 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 C2orf27AQ580R0 203 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 CCDC178Q5BJE1 867 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 DCAF17Q5H9S7 520 aaPredicted RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 ODR4Q5SWX8 454 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 KIAA1614Q5VZ46 1190 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 NAIF1Q69YI7 327 aaPredicted RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 SLFN12LQ6IEE8 588 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 SYNE3Q6ZMZ3 975 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 GSPT2Q8IYD1 628 aaKnown RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 PAF1Q8N7H5 531 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 IGSF22Q8N9C0 903 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 PLA2G15Q8NCC3 412 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 CHST14Q8NCH0 376 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 NACC2Q96BF6 587 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 ZG16BQ96DA0 208 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 ZNF496Q96IT1 587 aaPredicted RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 ZSWIM4Q9H7M6 989 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 C14orf93Q9H972 538 aaKnown RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 TRIM39Q9HCM9 518 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 ZMAT5Q9UDW3 170 aaKnown RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 BARX2Q9UMQ3 279 aaPredicted RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 DMRT1Q9Y5R6 373 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 BRD4O60885 1362 aaPredicted RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 HNRNPCP07910 306 aaKnown RBP eCLIP3.29□□□□□ -1.88
PMS1-209ENST00000424059 MYCLP1P12525 358 aaPredicted RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 BTF3P20290 206 aaKnown RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 GTF2F1P35269 517 aaKnown RBP eCLIP3.29□□□□□ -1.88
PMS1-209ENST00000424059 TRAPPC10P48553 1259 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 SCNN1GP51170 649 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 SESN3P58005 492 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 SLC6A3Q01959 620 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 ADCY2Q08462 1091 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 FNDC3BQ53EP0 1204 aaKnown RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 INO80DQ53TQ3 878 aaPredicted RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 CCDC158Q5M9N0 1113 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 FKBP15Q5T1M5 1219 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 LMBRD2Q68DH5 695 aaPredicted RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 CDK5RAP3Q96JB5 506 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 RMDN2Q96LZ7 410 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 GPHA2Q96T91 129 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 FEZ1Q99689 392 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 FAM167BQ9BTA0 163 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 NACA2Q9H009 215 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 OSBPL5Q9H0X9 879 aaPredicted RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 IL23AQ9NPF7 189 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 TBC1D7Q9P0N9 293 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 HECAQ9UBI9 543 aaPredicted RBP3.29□□□□□ -1.88
PMS1-209ENST00000424059 TBK1Q9UHD2 729 aa3.29□□□□□ -1.88
PMS1-209ENST00000424059 FSD2A1L4K1 749 aa3.28□□□□□ -1.88
PMS1-209ENST00000424059 GTPBP10A4D1E9 387 aaKnown RBP3.28□□□□□ -1.88
PMS1-209ENST00000424059 C2orf78A6NCI8 922 aa3.28□□□□□ -1.88
PMS1-209ENST00000424059 GOLGA8BA8MQT2 603 aa3.28□□□□□ -1.88
PMS1-209ENST00000424059 TMCO5BA8MYB1 307 aa3.28□□□□□ -1.88
PMS1-209ENST00000424059 H0Y3Z8 333 aa3.28□□□□□ -1.88
PMS1-209ENST00000424059 H7C1D1 291 aa3.28□□□□□ -1.88
PMS1-209ENST00000424059 DAPK3O43293 454 aa3.28□□□□□ -1.88
PMS1-209ENST00000424059 MFAP3LO75121 409 aa3.28□□□□□ -1.88
PMS1-209ENST00000424059 ASLP04424 464 aa3.28□□□□□ -1.88
PMS1-209ENST00000424059 IGFALSP35858 605 aa3.28□□□□□ -1.88
PMS1-209ENST00000424059 KIF11P52732 1056 aa3.28□□□□□ -1.88
PMS1-209ENST00000424059 IRX1P78414 480 aaPredicted RBP3.28□□□□□ -1.88
PMS1-209ENST00000424059 PPP2R5AQ15172 486 aa3.28□□□□□ -1.88
PMS1-209ENST00000424059 ELAVL1Q15717 326 aaKnown RBP3.28□□□□□ -1.88
PMS1-209ENST00000424059 TBC1D25Q3MII6 688 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms