RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 GMCL1P1Q8NEA9 526 aa16.06■□□□□ 0.16
SHISA9-201ENST00000423335 ISCUQ9H1K1 167 aa16.06■□□□□ 0.16
SHISA9-201ENST00000423335 SREBF1P36956 1147 aa16.05■□□□□ 0.16
SHISA9-201ENST00000423335 FXR2P51116 673 aaKnown RBP eCLIP16.05■□□□□ 0.16
SHISA9-201ENST00000423335 CLCN3P51790 818 aa16.05■□□□□ 0.16
SHISA9-201ENST00000423335 C2CD6Q53TS8 623 aa16.05■□□□□ 0.16
SHISA9-201ENST00000423335 ZNF571Q7Z3V5 609 aaPredicted RBP16.05■□□□□ 0.16
SHISA9-201ENST00000423335 A1CFQ9NQ94 594 aaKnown RBP16.05■□□□□ 0.16
SHISA9-201ENST00000423335 ADAM22Q9P0K1 906 aa16.05■□□□□ 0.16
SHISA9-201ENST00000423335 TOPAZ1Q8N9V7 1692 aa16.05■□□□□ 0.16
SHISA9-201ENST00000423335 EML1O00423 815 aa16.05■□□□□ 0.16
SHISA9-201ENST00000423335 STAM2O75886 525 aa16.05■□□□□ 0.16
SHISA9-201ENST00000423335 PHBP35232 272 aa16.05■□□□□ 0.16
SHISA9-201ENST00000423335 ARL1P40616 181 aaPredicted RBP16.05■□□□□ 0.16
SHISA9-201ENST00000423335 SARNPP82979 210 aaKnown RBP16.05■□□□□ 0.16
SHISA9-201ENST00000423335 TMEM270Q6UE05 265 aa16.05■□□□□ 0.16
SHISA9-201ENST00000423335 AGPAT1Q99943 283 aa16.05■□□□□ 0.16
SHISA9-201ENST00000423335 DDX23Q9BUQ8 820 aaKnown RBP16.05■□□□□ 0.16
SHISA9-201ENST00000423335 DNAJC18Q9H819 358 aa16.05■□□□□ 0.16
SHISA9-201ENST00000423335 ALG13Q9NP73 1137 aaKnown RBP16.05■□□□□ 0.16
SHISA9-201ENST00000423335 INHBAP08476 426 aa16.05■□□□□ 0.16
SHISA9-201ENST00000423335 CHRNA3P32297 505 aa16.05■□□□□ 0.16
SHISA9-201ENST00000423335 RINT1Q6NUQ1 792 aa16.05■□□□□ 0.16
SHISA9-201ENST00000423335 JAMLQ86YT9 394 aa16.05■□□□□ 0.16
SHISA9-201ENST00000423335 SCFD2Q8WU76 684 aa16.05■□□□□ 0.16
SHISA9-201ENST00000423335 XPO6Q96QU8 1125 aaKnown RBP16.05■□□□□ 0.16
SHISA9-201ENST00000423335 MOV10L1Q9BXT6 1211 aaKnown RBP16.05■□□□□ 0.16
SHISA9-201ENST00000423335 PI4K2BG5E9Z4 385 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 RNF8O76064 485 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 RARBP10826 455 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 ORC2Q13416 577 aaPredicted RBP16.04■□□□□ 0.16
SHISA9-201ENST00000423335 BYSLQ13895 437 aaKnown RBP16.04■□□□□ 0.16
SHISA9-201ENST00000423335 FIGNQ5HY92 759 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 KIRREL3Q8IZU9 778 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 OR6B3Q8NGW1 331 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 TPCN2Q8NHX9 752 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 TRAPPC12Q8WVT3 735 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 TGS1Q96RS0 853 aaKnown RBP16.04■□□□□ 0.16
SHISA9-201ENST00000423335 THAP2Q9H0W7 228 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 AGO2Q9UKV8 859 aaKnown RBP16.04■□□□□ 0.16
SHISA9-201ENST00000423335 ATRNO75882 1429 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 PSMC4P43686 418 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 KYNUQ16719 465 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 FAM117BQ6P1L5 589 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 PDCD7Q8N8D1 485 aaKnown RBP16.04■□□□□ 0.16
SHISA9-201ENST00000423335 SCFD1Q8WVM8 642 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 PLS3P13797 630 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 DSG3P32926 999 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 BPIFB4P59827 614 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 KRT17Q04695 432 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 BBOF1Q8ND07 529 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 IL31RAQ8NI17 732 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 SREK1Q8WXA9 508 aaKnown RBP16.04■□□□□ 0.16
SHISA9-201ENST00000423335 BTBD6Q96KE9 485 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 ZWILCHQ9H900 591 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 GINM1Q9NU53 330 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 FGFR1OP2Q9NVK5 253 aa16.04■□□□□ 0.16
SHISA9-201ENST00000423335 RBAKQ9NYW8 714 aaPredicted RBP16.04■□□□□ 0.16
SHISA9-201ENST00000423335 TPX2Q9ULW0 747 aaKnown RBP16.04■□□□□ 0.16
SHISA9-201ENST00000423335 AKAP3O75969 853 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 SMAD1Q15797 465 aaKnown RBP16.03■□□□□ 0.16
SHISA9-201ENST00000423335 HADHQ16836 314 aaKnown RBP16.03■□□□□ 0.16
SHISA9-201ENST00000423335 EDRF1Q3B7T1 1238 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 SYCP2LQ5T4T6 812 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 FBXO25Q8TCJ0 367 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 FAM167AQ96KS9 214 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 HEXIM2Q96MH2 286 aaKnown RBP16.03■□□□□ 0.16
SHISA9-201ENST00000423335 PNMA5Q96PV4 448 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 TUFT1Q9NNX1 390 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 SLC40A1Q9NP59 571 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 APEX2Q9UBZ4 518 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 MAGED2Q9UNF1 606 aaPredicted RBP16.03■□□□□ 0.16
SHISA9-201ENST00000423335 PITPNM2Q9BZ72 1349 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 PIK3R2O00459 728 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 DGAT1O75907 488 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 PDHA1P08559 390 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 COMTP21964 271 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 PON1P27169 355 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 TRADDQ15628 312 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 LGSNQ5TDP6 509 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 DNAJC24Q6P3W2 148 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 EPM2AIP1Q7L775 607 aaPredicted RBP16.03■□□□□ 0.16
SHISA9-201ENST00000423335 ARHGAP24Q8N264 748 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 SPATA20Q8TB22 786 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 RIT2Q99578 217 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 ERP44Q9BS26 406 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 VCXQ9H320 206 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 BLOC1S4Q9NUP1 217 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 NOP53Q9NZM5 478 aaKnown RBP16.03■□□□□ 0.16
SHISA9-201ENST00000423335 CPSF2Q9P2I0 782 aaKnown RBP16.03■□□□□ 0.16
SHISA9-201ENST00000423335 COMMD10Q9Y6G5 202 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 PRRC2BQ5JSZ5 2229 aaKnown RBP16.03■□□□□ 0.16
SHISA9-201ENST00000423335 KLRC4O43908 158 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 RFX8Q6ZV50 586 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 RFX6Q8HWS3 928 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 CHST13Q8NET6 341 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 ZNF507Q8TCN5 953 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 CFAP57Q96MR6 1250 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 PI4K2AQ9BTU6 479 aa16.03■□□□□ 0.16
SHISA9-201ENST00000423335 STK33Q9BYT3 514 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms