RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 OSTNP61366 133 aa16.67■□□□□ 0.26
USB1-202ENST00000423271 BRAPQ7Z569 592 aa16.67■□□□□ 0.26
USB1-202ENST00000423271 ZBTB33Q86T24 672 aa16.67■□□□□ 0.26
USB1-202ENST00000423271 PALB2Q86YC2 1186 aa16.67■□□□□ 0.26
USB1-202ENST00000423271 PPP1R10Q96QC0 940 aaKnown RBP16.67■□□□□ 0.26
USB1-202ENST00000423271 TIPINQ9BVW5 301 aa16.67■□□□□ 0.26
USB1-202ENST00000423271 ARIH1Q9Y4X5 557 aaPredicted RBP16.67■□□□□ 0.26
USB1-202ENST00000423271 TGM5O43548 720 aa16.66■□□□□ 0.26
USB1-202ENST00000423271 ASGR2P07307 311 aa16.66■□□□□ 0.26
USB1-202ENST00000423271 PLS3P13797 630 aa16.66■□□□□ 0.26
USB1-202ENST00000423271 PROZP22891 400 aa16.66■□□□□ 0.26
USB1-202ENST00000423271 GRM5P41594 1212 aa16.66■□□□□ 0.26
USB1-202ENST00000423271 SIGLEC14Q08ET2 396 aa16.66■□□□□ 0.26
USB1-202ENST00000423271 SF3A1Q15459 793 aaKnown RBP16.66■□□□□ 0.26
USB1-202ENST00000423271 FAM171A1Q5VUB5 890 aa16.66■□□□□ 0.26
USB1-202ENST00000423271 CCDC149Q6ZUS6 474 aa16.66■□□□□ 0.26
USB1-202ENST00000423271 KREMEN2Q8NCW0 462 aa16.66■□□□□ 0.26
USB1-202ENST00000423271 TMEM161BQ8NDZ6 487 aa16.66■□□□□ 0.26
USB1-202ENST00000423271 CMASQ8NFW8 434 aaPredicted RBP16.66■□□□□ 0.26
USB1-202ENST00000423271 SPIRE2Q8WWL2 714 aa16.66■□□□□ 0.26
USB1-202ENST00000423271 ASIC4Q96FT7 647 aa16.66■□□□□ 0.26
USB1-202ENST00000423271 AK8Q96MA6 479 aa16.66■□□□□ 0.26
USB1-202ENST00000423271 SMOC2Q9H3U7 446 aa16.66■□□□□ 0.26
USB1-202ENST00000423271 C17orf75Q9HAS0 396 aa16.66■□□□□ 0.26
USB1-202ENST00000423271 GOLGA2P5Q9HBQ8 144 aa16.66■□□□□ 0.26
USB1-202ENST00000423271 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.66■□□□□ 0.26
USB1-202ENST00000423271 FNIP2Q9P278 1114 aa16.66■□□□□ 0.26
USB1-202ENST00000423271 RBM19Q9Y4C8 960 aaKnown RBP16.66■□□□□ 0.26
USB1-202ENST00000423271 MTCL1Q9Y4B5 1905 aaKnown RBP16.66■□□□□ 0.26
USB1-202ENST00000423271 CCDC195A0A1B0GUA6 201 aa16.65■□□□□ 0.26
USB1-202ENST00000423271 MEFVO15553 781 aaPredicted RBP16.65■□□□□ 0.26
USB1-202ENST00000423271 HARSP12081 509 aaKnown RBP16.65■□□□□ 0.26
USB1-202ENST00000423271 SOX4Q06945 474 aaPredicted RBP16.65■□□□□ 0.26
USB1-202ENST00000423271 ARSHQ5FYA8 562 aa16.65■□□□□ 0.26
USB1-202ENST00000423271 C15orf39Q6ZRI6 1047 aa16.65■□□□□ 0.26
USB1-202ENST00000423271 APBB1IPQ7Z5R6 666 aaPredicted RBP16.65■□□□□ 0.26
USB1-202ENST00000423271 BMP8AQ7Z5Y6 402 aa16.65■□□□□ 0.26
USB1-202ENST00000423271 CEP57Q86XR8 500 aa16.65■□□□□ 0.26
USB1-202ENST00000423271 GPR65Q8IYL9 337 aa16.65■□□□□ 0.26
USB1-202ENST00000423271 ZDHHC14Q8IZN3 488 aa16.65■□□□□ 0.26
USB1-202ENST00000423271 KCTD17Q8N5Z5 321 aa16.65■□□□□ 0.26
USB1-202ENST00000423271 PBXIP1Q96AQ6 731 aa16.65■□□□□ 0.26
USB1-202ENST00000423271 ZNF707Q96C28 371 aaPredicted RBP16.65■□□□□ 0.26
USB1-202ENST00000423271 ZBTB45Q96K62 511 aaPredicted RBP16.65■□□□□ 0.26
USB1-202ENST00000423271 NTPCRQ9BSD7 190 aaKnown RBP16.65■□□□□ 0.26
USB1-202ENST00000423271 TTPALQ9BTX7 342 aa16.65■□□□□ 0.26
USB1-202ENST00000423271 CCDC94Q9BW85 323 aaPredicted RBP16.65■□□□□ 0.26
USB1-202ENST00000423271 LIMD1Q9UGP4 676 aa16.65■□□□□ 0.26
USB1-202ENST00000423271 MTMR6Q9Y217 621 aa16.65■□□□□ 0.26
USB1-202ENST00000423271 USTQ9Y2C2 406 aa16.65■□□□□ 0.26
USB1-202ENST00000423271 CITO14578 2027 aa16.65■□□□□ 0.26
USB1-202ENST00000423271 SMIM28A0A1B0GU29 152 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 STX6O43752 255 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 BRD1O95696 1058 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 MAPTP10636 758 aaKnown RBP16.64■□□□□ 0.25
USB1-202ENST00000423271 MCF2P10911 925 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 UBA7P41226 1012 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 CLCNKBP51801 687 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 YARSP54577 528 aaKnown RBP16.64■□□□□ 0.25
USB1-202ENST00000423271 BECN1Q14457 450 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 DHX8Q14562 1220 aaKnown RBP16.64■□□□□ 0.25
USB1-202ENST00000423271 KARSQ15046 597 aaKnown RBP16.64■□□□□ 0.25
USB1-202ENST00000423271 PSMD5Q16401 504 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 LILRA6Q6PI73 481 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 MPZL3Q6UWV2 235 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 CD300LGQ6UXG3 332 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 ALKAL1Q6UXT8 129 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 GPBP1Q86WP2 473 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 C3orf58Q8NDZ4 430 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 LNX1Q8TBB1 728 aaPredicted RBP16.64■□□□□ 0.25
USB1-202ENST00000423271 PIK3R5Q8WYR1 880 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 SNX27Q96L92 541 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 MFSD14AQ96MC6 490 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 ZMAT2Q96NC0 199 aaKnown RBP16.64■□□□□ 0.25
USB1-202ENST00000423271 CLSTN3Q9BQT9 956 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 REEP2Q9BRK0 252 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 TCHPQ9BT92 498 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 BLOC1S4Q9NUP1 217 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 KCND2Q9NZV8 630 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 ANKFY1Q9P2R3 1169 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 SORCS3Q9UPU3 1222 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 CLIC4Q9Y696 253 aa16.64■□□□□ 0.25
USB1-202ENST00000423271 KMT2EQ8IZD2 1858 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 TMEM189-UBE2V1I3L0A0 370 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 I3L4J1 428 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 ADAM12O43184 909 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 SLC26A4O43511 780 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 N4BP1O75113 896 aaKnown RBP16.63■□□□□ 0.25
USB1-202ENST00000423271 B3GAT3O94766 335 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 BMP15O95972 392 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 PDGFBP01127 241 aaPredicted RBP16.63■□□□□ 0.25
USB1-202ENST00000423271 PLCG1P19174 1290 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 LONP1P36776 959 aaKnown RBP16.63■□□□□ 0.25
USB1-202ENST00000423271 CREMQ03060 361 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 STRN3Q13033 797 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 RESTQ13127 1097 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 MTMR3Q13615 1198 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 MCM6Q14566 821 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 UPP1Q16831 310 aa16.63■□□□□ 0.25
USB1-202ENST00000423271 SEZ6Q53EL9 994 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms