RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 SSTR3P32745 418 aaPredicted RBP16.91■□□□□ 0.3
CDH1-202ENST00000422392 RPS6P62753 249 aaKnown RBP16.91■□□□□ 0.3
CDH1-202ENST00000422392 SLC39A4Q6P5W5 647 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 RSBN1LQ6PCB5 846 aaPredicted RBP16.91■□□□□ 0.3
CDH1-202ENST00000422392 CCDC197Q8NCU1 140 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 SYTL5Q8TDW5 730 aaPredicted RBP16.91■□□□□ 0.3
CDH1-202ENST00000422392 CPA5Q8WXQ8 436 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 RAB20Q9NX57 234 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 ASIC3Q9UHC3 531 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 GGT7Q9UJ14 662 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 CD2APQ9Y5K6 639 aa16.91■□□□□ 0.3
CDH1-202ENST00000422392 O00370 1275 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 CALCOCO2Q13137 446 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 CYB5D1Q6P9G0 228 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 EXOC3L1Q86VI1 746 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 FBXL13Q8NEE6 735 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 VTI1AQ96AJ9 217 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 NT5C1BQ96P26 610 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 TELO2Q9Y4R8 837 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 SORBS3O60504 671 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 PLA2G6O60733 806 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 SLMAPQ14BN4 828 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 SPDYE2Q495Y8 402 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 PCNX4Q63HM2 1172 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 ANO5Q75V66 913 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 SV2AQ7L0J3 742 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 IPO4Q8TEX9 1081 aaKnown RBP16.9■□□□□ 0.3
CDH1-202ENST00000422392 TAOK3Q9H2K8 898 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 TMEM8AQ9HCN3 771 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 TCEAL9Q9UHQ7 104 aa16.9■□□□□ 0.3
CDH1-202ENST00000422392 MAPK4P31152 587 aa16.89■□□□□ 0.3
CDH1-202ENST00000422392 HSPA1LP34931 641 aa16.89■□□□□ 0.3
CDH1-202ENST00000422392 PGM5Q15124 567 aa16.89■□□□□ 0.3
CDH1-202ENST00000422392 POMGNT1Q8WZA1 660 aa16.89■□□□□ 0.3
CDH1-202ENST00000422392 HEMGNQ9BXL5 484 aa16.89■□□□□ 0.3
CDH1-202ENST00000422392 UVRAGQ9P2Y5 699 aa16.89■□□□□ 0.3
CDH1-202ENST00000422392 ADGRA3Q8IWK6 1321 aa16.89■□□□□ 0.29
CDH1-202ENST00000422392 GPC3P51654 580 aa16.89■□□□□ 0.29
CDH1-202ENST00000422392 ADCY1Q08828 1119 aa16.89■□□□□ 0.29
CDH1-202ENST00000422392 ACAD10Q6JQN1 1059 aa16.89■□□□□ 0.29
CDH1-202ENST00000422392 OGFOD1Q8N543 542 aa16.89■□□□□ 0.29
CDH1-202ENST00000422392 MORC4Q8TE76 937 aa16.89■□□□□ 0.29
CDH1-202ENST00000422392 TMEM174Q8WUU8 243 aa16.89■□□□□ 0.29
CDH1-202ENST00000422392 CNKSR1Q969H4 720 aa16.89■□□□□ 0.29
CDH1-202ENST00000422392 ZKSCAN4Q969J2 545 aaPredicted RBP16.89■□□□□ 0.29
CDH1-202ENST00000422392 ST6GALNAC4Q9H4F1 302 aa16.89■□□□□ 0.29
CDH1-202ENST00000422392 LRRC19Q9H756 370 aa16.89■□□□□ 0.29
CDH1-202ENST00000422392 KMT5AQ9NQR1 393 aa16.89■□□□□ 0.29
CDH1-202ENST00000422392 R3HDM2Q9Y2K5 976 aaKnown RBP16.89■□□□□ 0.29
CDH1-202ENST00000422392 CCT8L1PA6NM43 557 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 MAPK13O15264 365 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 RRM1P23921 792 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 PSMC5P62195 406 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 SP4Q02446 784 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 PDE4CQ08493 712 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 DMP1Q13316 513 aaPredicted RBP16.88■□□□□ 0.29
CDH1-202ENST00000422392 CNGA2Q16280 664 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 LACTB2Q53H82 288 aaPredicted RBP16.88■□□□□ 0.29
CDH1-202ENST00000422392 CYFIP1Q7L576 1253 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 PRUNE1Q86TP1 453 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 TAX1BP1Q86VP1 789 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 FAM228AQ86W67 206 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 MAP4K3Q8IVH8 894 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 TEX2Q8IWB9 1127 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 C4orf19Q8IY42 314 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 MROH7Q68CQ1 1323 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 SCP2P22307 547 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 GBP1P32455 592 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 KYNUQ16719 465 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 CLEC16AQ2KHT3 1053 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 FAM133BQ5BKY9 247 aaKnown RBP16.88■□□□□ 0.29
CDH1-202ENST00000422392 TNFAIP8L3Q5GJ75 292 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 PIGWQ7Z7B1 504 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 C12orf50Q8NA57 414 aaPredicted RBP16.88■□□□□ 0.29
CDH1-202ENST00000422392 DEFB129Q9H1M3 183 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 ZNF277Q9NRM2 450 aaPredicted RBP16.88■□□□□ 0.29
CDH1-202ENST00000422392 COQ4Q9Y3A0 265 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 PSME4Q14997 1843 aa16.88■□□□□ 0.29
CDH1-202ENST00000422392 FSCN2O14926 492 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 LYPLA2O95372 231 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 CFHP08603 1231 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 CYP24A1Q07973 514 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 PARP9Q8IXQ6 854 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 ANKS4BQ8N8V4 417 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 SCLT1Q96NL6 688 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 RMDN3Q96TC7 470 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 FAM213AQ9BRX8 229 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 KDM4CQ9H3R0 1056 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 TBC1D22BQ9NU19 505 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 COL4A5P29400 1685 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 HNRNPDLO14979 420 aaKnown RBP16.87■□□□□ 0.29
CDH1-202ENST00000422392 PMM2O15305 246 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 GJC1P36383 396 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 ITGA8P53708 1063 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 ZNF568Q3ZCX4 644 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 SPOPLQ6IQ16 392 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 SEPT14Q6ZU15 432 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 ANKRD42Q8N9B4 389 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 DYDC1Q8WWB3 177 aa16.87■□□□□ 0.29
CDH1-202ENST00000422392 ARHGEF2Q92974 986 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms