RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 COL3A1P02461 1466 aaPredicted RBP6.23□□□□□ -1.41
SFXN1-202ENST00000421887 MED23Q9ULK4 1368 aa6.23□□□□□ -1.41
SFXN1-202ENST00000421887 CPP00450 1065 aa6.23□□□□□ -1.41
SFXN1-202ENST00000421887 ANXA1P04083 346 aa6.23□□□□□ -1.41
SFXN1-202ENST00000421887 RPS19P39019 145 aaKnown RBP6.23□□□□□ -1.41
SFXN1-202ENST00000421887 RBM5P52756 815 aaKnown RBP eCLIP6.23□□□□□ -1.41
SFXN1-202ENST00000421887 TUSC3Q13454 348 aa6.23□□□□□ -1.41
SFXN1-202ENST00000421887 CD276Q5ZPR3 534 aa6.23□□□□□ -1.41
SFXN1-202ENST00000421887 FAM109BQ6ICB4 259 aaPredicted RBP6.23□□□□□ -1.41
SFXN1-202ENST00000421887 SGMS1Q86VZ5 419 aa6.23□□□□□ -1.41
SFXN1-202ENST00000421887 MAFAQ8NHW3 353 aaPredicted RBP6.23□□□□□ -1.41
SFXN1-202ENST00000421887 CPLX3Q8WVH0 158 aa6.23□□□□□ -1.41
SFXN1-202ENST00000421887 PAWRQ96IZ0 340 aaKnown RBP6.23□□□□□ -1.41
SFXN1-202ENST00000421887 DEFB118Q96PH6 123 aa6.23□□□□□ -1.41
SFXN1-202ENST00000421887 ZCCHC17Q9NP64 241 aaKnown RBP6.23□□□□□ -1.41
SFXN1-202ENST00000421887 ZNF804BA4D1E1 1349 aa6.23□□□□□ -1.41
SFXN1-202ENST00000421887 FAM205AQ6ZU69 1335 aa6.23□□□□□ -1.41
SFXN1-202ENST00000421887 SPEF2Q9C093 1822 aa6.22□□□□□ -1.41
SFXN1-202ENST00000421887 CLRN2A0PK11 232 aa6.22□□□□□ -1.41
SFXN1-202ENST00000421887 SCG5P05408 212 aa6.22□□□□□ -1.41
SFXN1-202ENST00000421887 KRT4P19013 534 aa6.22□□□□□ -1.41
SFXN1-202ENST00000421887 CASP7P55210 303 aa6.22□□□□□ -1.41
SFXN1-202ENST00000421887 FANCCQ00597 558 aa6.22□□□□□ -1.41
SFXN1-202ENST00000421887 DUSP8Q13202 625 aa6.22□□□□□ -1.41
SFXN1-202ENST00000421887 SNAPC2Q13487 334 aa6.22□□□□□ -1.41
SFXN1-202ENST00000421887 CCDC142Q17RM4 750 aa6.22□□□□□ -1.41
SFXN1-202ENST00000421887 PROSER3Q2NL68 480 aa6.22□□□□□ -1.41
SFXN1-202ENST00000421887 SV2CQ496J9 727 aa6.22□□□□□ -1.41
SFXN1-202ENST00000421887 ULK2Q8IYT8 1036 aa6.22□□□□□ -1.41
SFXN1-202ENST00000421887 GUCD1Q96NT3 240 aa6.22□□□□□ -1.41
SFXN1-202ENST00000421887 CDC5LQ99459 802 aaKnown RBP6.22□□□□□ -1.41
SFXN1-202ENST00000421887 ZNF703Q9H7S9 590 aaPredicted RBP6.22□□□□□ -1.41
SFXN1-202ENST00000421887 AURKAIP1Q9NWT8 199 aaPredicted RBP6.22□□□□□ -1.41
SFXN1-202ENST00000421887 CPA4Q9UI42 421 aa6.22□□□□□ -1.41
SFXN1-202ENST00000421887 TSPYL4Q9UJ04 414 aa6.22□□□□□ -1.41
SFXN1-202ENST00000421887 SSC5DA1L4H1 1573 aa6.22□□□□□ -1.41
SFXN1-202ENST00000421887 COL4A1P02462 1669 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 BTBD19C9JJ37 291 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 MATN2O00339 956 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 ADCY3O60266 1144 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 CUTAO60888 179 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 HSPA5P11021 654 aaKnown RBP6.21□□□□□ -1.42
SFXN1-202ENST00000421887 HHEXQ03014 270 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 PRKCZQ05513 592 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 VGLL4Q14135 290 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 RASA3Q14644 834 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 TESK1Q15569 626 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 LRCH2Q5VUJ6 765 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 DENND5AQ6IQ26 1287 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 ZBTB38Q8NAP3 1195 aaPredicted RBP6.21□□□□□ -1.42
SFXN1-202ENST00000421887 PLBD2Q8NHP8 589 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 SPATA32Q96LK8 384 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 CCDC140Q96MF4 163 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 PARPBPQ9NWS1 579 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 PLA2G3Q9NZ20 509 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 CEP72Q9P209 647 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 PUF60Q9UHX1 559 aaKnown RBP6.21□□□□□ -1.42
SFXN1-202ENST00000421887 DDX41Q9UJV9 622 aaKnown RBP6.21□□□□□ -1.42
SFXN1-202ENST00000421887 VCANP13611 3396 aa6.21□□□□□ -1.42
SFXN1-202ENST00000421887 ZNF839A8K0R7 811 aa6.2□□□□□ -1.42
SFXN1-202ENST00000421887 PDE8AO60658 829 aa6.2□□□□□ -1.42
SFXN1-202ENST00000421887 KCNJ4P48050 445 aa6.2□□□□□ -1.42
SFXN1-202ENST00000421887 CCT4P50991 539 aaKnown RBP6.2□□□□□ -1.42
SFXN1-202ENST00000421887 MAP3K12Q12852 859 aa6.2□□□□□ -1.42
SFXN1-202ENST00000421887 TOP3AQ13472 1001 aaPredicted RBP6.2□□□□□ -1.42
SFXN1-202ENST00000421887 NCAPHQ15003 741 aa6.2□□□□□ -1.42
SFXN1-202ENST00000421887 CFAP100Q494V2 611 aa6.2□□□□□ -1.42
SFXN1-202ENST00000421887 C17orf99Q6UX52 265 aa6.2□□□□□ -1.42
SFXN1-202ENST00000421887 LRP10Q7Z4F1 713 aa6.2□□□□□ -1.42
SFXN1-202ENST00000421887 ZNF227Q86WZ6 799 aa6.2□□□□□ -1.42
SFXN1-202ENST00000421887 ERO1BQ86YB8 467 aa6.2□□□□□ -1.42
SFXN1-202ENST00000421887 TMEM145Q8NBT3 493 aa6.2□□□□□ -1.42
SFXN1-202ENST00000421887 ZBED3Q96IU2 234 aaPredicted RBP6.2□□□□□ -1.42
SFXN1-202ENST00000421887 SHDQ96IW2 340 aa6.2□□□□□ -1.42
SFXN1-202ENST00000421887 CDX2Q99626 313 aaPredicted RBP6.2□□□□□ -1.42
SFXN1-202ENST00000421887 LBHD1Q9BQE6 289 aaPredicted RBP6.2□□□□□ -1.42
SFXN1-202ENST00000421887 CDIP1Q9H305 208 aa6.2□□□□□ -1.42
SFXN1-202ENST00000421887 GIT1Q9Y2X7 761 aa6.2□□□□□ -1.42
SFXN1-202ENST00000421887 MYH3P11055 1940 aa6.2□□□□□ -1.42
SFXN1-202ENST00000421887 ADGRA2Q96PE1 1338 aa6.2□□□□□ -1.42
SFXN1-202ENST00000421887 AK9Q5TCS8 1911 aa6.19□□□□□ -1.42
SFXN1-202ENST00000421887 PDHXO00330 501 aa6.19□□□□□ -1.42
SFXN1-202ENST00000421887 COL6A2P12110 1019 aa6.19□□□□□ -1.42
SFXN1-202ENST00000421887 FOSL2P15408 326 aa6.19□□□□□ -1.42
SFXN1-202ENST00000421887 MRPS21P82921 87 aaKnown RBP6.19□□□□□ -1.42
SFXN1-202ENST00000421887 COL10A1Q03692 680 aa6.19□□□□□ -1.42
SFXN1-202ENST00000421887 TBR1Q16650 682 aa6.19□□□□□ -1.42
SFXN1-202ENST00000421887 LAIR1Q6GTX8 287 aa6.19□□□□□ -1.42
SFXN1-202ENST00000421887 DIS3LQ8TF46 1054 aaKnown RBP6.19□□□□□ -1.42
SFXN1-202ENST00000421887 HOOK2Q96ED9 719 aa6.19□□□□□ -1.42
SFXN1-202ENST00000421887 SCYL1Q96KG9 808 aa6.19□□□□□ -1.42
SFXN1-202ENST00000421887 PRMT6Q96LA8 375 aaPredicted RBP6.19□□□□□ -1.42
SFXN1-202ENST00000421887 PARK7Q99497 189 aaKnown RBP6.19□□□□□ -1.42
SFXN1-202ENST00000421887 ISCA1Q9BUE6 129 aa6.19□□□□□ -1.42
SFXN1-202ENST00000421887 BACH2Q9BYV9 841 aa6.19□□□□□ -1.42
SFXN1-202ENST00000421887 C11orf49Q9H6J7 331 aa6.19□□□□□ -1.42
SFXN1-202ENST00000421887 SLC39A2Q9NP94 309 aa6.19□□□□□ -1.42
SFXN1-202ENST00000421887 PPARGC1AQ9UBK2 798 aaKnown RBP6.19□□□□□ -1.42
SFXN1-202ENST00000421887 MAPK8IP3Q9UPT6 1336 aa6.19□□□□□ -1.42
SFXN1-202ENST00000421887 DDX60LQ5H9U9 1706 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms