RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 TXLNGQ9NUQ3 528 aa22.71■■□□□ 1.23
USP48-205ENST00000421625 SPATS2LQ9NUQ6 558 aaKnown RBP22.71■■□□□ 1.23
USP48-205ENST00000421625 STK24Q9Y6E0 443 aa22.71■■□□□ 1.23
USP48-205ENST00000421625 TULP1O00294 542 aaPredicted RBP22.71■■□□□ 1.23
USP48-205ENST00000421625 GTF2IP78347 998 aa22.71■■□□□ 1.23
USP48-205ENST00000421625 SLC47A2Q86VL8 602 aa22.71■■□□□ 1.23
USP48-205ENST00000421625 SLCO2A1Q92959 643 aa22.71■■□□□ 1.23
USP48-205ENST00000421625 FSCN2O14926 492 aa22.7■■□□□ 1.22
USP48-205ENST00000421625 EEF2P13639 858 aaKnown RBP22.7■■□□□ 1.22
USP48-205ENST00000421625 SLFN13Q68D06 897 aa22.7■■□□□ 1.22
USP48-205ENST00000421625 LRMDAQ9H2I8 198 aa22.7■■□□□ 1.22
USP48-205ENST00000421625 CHKBQ9Y259 395 aa22.7■■□□□ 1.22
USP48-205ENST00000421625 CYP26A1O43174 497 aa22.7■■□□□ 1.22
USP48-205ENST00000421625 RAD23BP54727 409 aa22.7■■□□□ 1.22
USP48-205ENST00000421625 RBM26Q5T8P6 1007 aaKnown RBP22.7■■□□□ 1.22
USP48-205ENST00000421625 C9orf72Q96LT7 481 aa22.7■■□□□ 1.22
USP48-205ENST00000421625 WRAP73Q9P2S5 460 aaPredicted RBP22.7■■□□□ 1.22
USP48-205ENST00000421625 LGALS13Q9UHV8 139 aa22.7■■□□□ 1.22
USP48-205ENST00000421625 POLGP54098 1239 aaPredicted RBP22.69■■□□□ 1.22
USP48-205ENST00000421625 DNAJC3Q13217 504 aa22.69■■□□□ 1.22
USP48-205ENST00000421625 ZSWIM2Q8NEG5 633 aa22.69■■□□□ 1.22
USP48-205ENST00000421625 PARD3BQ8TEW8 1205 aa22.69■■□□□ 1.22
USP48-205ENST00000421625 AMNQ9BXJ7 453 aa22.69■■□□□ 1.22
USP48-205ENST00000421625 SPAG7O75391 227 aa22.69■■□□□ 1.22
USP48-205ENST00000421625 CYP1A2P05177 515 aa22.69■■□□□ 1.22
USP48-205ENST00000421625 CALB2P22676 271 aa22.69■■□□□ 1.22
USP48-205ENST00000421625 CIITAP33076 1130 aa22.69■■□□□ 1.22
USP48-205ENST00000421625 INHBEP58166 350 aa22.69■■□□□ 1.22
USP48-205ENST00000421625 ICA1Q05084 483 aa22.69■■□□□ 1.22
USP48-205ENST00000421625 ANO7Q6IWH7 933 aa22.69■■□□□ 1.22
USP48-205ENST00000421625 PRR5LQ6MZQ0 368 aa22.69■■□□□ 1.22
USP48-205ENST00000421625 FAM13CQ8NE31 585 aa22.69■■□□□ 1.22
USP48-205ENST00000421625 SPDYE1Q8NFV5 336 aaPredicted RBP22.69■■□□□ 1.22
USP48-205ENST00000421625 ZBTB10Q96DT7 871 aa22.69■■□□□ 1.22
USP48-205ENST00000421625 POLLQ9UGP5 575 aa22.69■■□□□ 1.22
USP48-205ENST00000421625 ANAPC5Q9UJX4 755 aa22.69■■□□□ 1.22
USP48-205ENST00000421625 TCEA3O75764 348 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 GYS1P13807 737 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 CALRP27797 417 aaKnown RBP22.68■■□□□ 1.22
USP48-205ENST00000421625 FMO1Q01740 532 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 PTK6Q13882 451 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 TMED2Q15363 201 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 PARP6Q2NL67 630 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 EPC2Q52LR7 807 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 KIAA1683Q9H0B3 1180 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 SLCO1B3Q9NPD5 702 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 ATF2P15336 505 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 ATP2B4P23634 1241 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 ADCY8P40145 1251 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 OTOP1Q7RTM1 612 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 GRAMD1AQ96CP6 724 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 FAM118BQ9BPY3 351 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 WDR18Q9BV38 432 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 R3HDM2Q9Y2K5 976 aaKnown RBP22.68■■□□□ 1.22
USP48-205ENST00000421625 LRRC42Q9Y546 428 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 UBE4BO95155 1302 aa22.68■■□□□ 1.22
USP48-205ENST00000421625 DPPA5A6NC42 116 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 RASA4BC9J798 803 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 RASA4O43374 803 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 CDH16O75309 829 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 TPBGLP0DKB5 382 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 GZMAP12544 262 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 IL9RQ01113 521 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 PPP1R21Q6ZMI0 780 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 FBXO11Q86XK2 927 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 CYP39A1Q9NYL5 469 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 IGLV3-22A0A075B6J6 115 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 ATP4AP20648 1035 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 VAMP7P51809 220 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 SETDB1Q15047 1291 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 C1orf220Q5T0J3 134 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 THEMIS2Q5TEJ8 643 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 ZNF449Q6P9G9 518 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 STXBP4Q6ZWJ1 553 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 STK32AQ8WU08 396 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 KREMEN1Q96MU8 473 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 TUFT1Q9NNX1 390 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 SEL1LQ9UBV2 794 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 MYH11P35749 1972 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 GREB1LQ9C091 1923 aaPredicted RBP22.67■■□□□ 1.22
USP48-205ENST00000421625 H0Y3Z8 333 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 SYDE2Q5VT97 1194 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 ZFPM1Q8IX07 1006 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 PLEKHO2Q8TD55 490 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 PHTF1Q9UMS5 762 aa22.67■■□□□ 1.22
USP48-205ENST00000421625 FOSP01100 380 aaPredicted RBP22.66■■□□□ 1.22
USP48-205ENST00000421625 PDHA1P08559 390 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 RRM1P23921 792 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 CTCFP49711 727 aaPredicted RBP22.66■■□□□ 1.22
USP48-205ENST00000421625 TUBP50607 506 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 SCNN1DP51172 638 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 RASA3Q14644 834 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 LONP2Q86WA8 852 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 TTC8Q8TAM2 541 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 NUDCD1Q96RS6 583 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 TRAIPQ9BWF2 469 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 GTF3C4Q9UKN8 822 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 FAM47DPA6NHR8 397 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 EPHB2P29323 1055 aa22.66■■□□□ 1.22
USP48-205ENST00000421625 SARNPP82979 210 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms