RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 RCAN1P53805 252 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 ACTR2P61160 394 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 PABPC1LQ4VXU2 614 aaKnown RBP6.34□□□□□ -1.39
HDAC8-212ENST00000421523 CEP55Q53EZ4 464 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 PPM1LQ5SGD2 360 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 PKN3Q6P5Z2 889 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 ABHD15Q6UXT9 468 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 CCNI2Q6ZMN8 369 aaPredicted RBP6.34□□□□□ -1.39
HDAC8-212ENST00000421523 NFXL1Q6ZNB6 911 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 FAM43BQ6ZT52 329 aaPredicted RBP6.34□□□□□ -1.39
HDAC8-212ENST00000421523 NIPA1Q7RTP0 329 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 MICU3Q86XE3 530 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 TNPO1Q92973 898 aaKnown RBP6.34□□□□□ -1.39
HDAC8-212ENST00000421523 IRF7Q92985 503 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 TCEANC2Q96MN5 208 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 SCLT1Q96NL6 688 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 FCRL3Q96P31 734 aaPredicted RBP6.34□□□□□ -1.39
HDAC8-212ENST00000421523 TRMT61BQ9BVS5 477 aaKnown RBP6.34□□□□□ -1.39
HDAC8-212ENST00000421523 AGXT2Q9BYV1 514 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 RXFP1Q9HBX9 757 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 AGO4Q9HCK5 861 aaKnown RBP6.34□□□□□ -1.39
HDAC8-212ENST00000421523 ZNF334Q9HCZ1 680 aaPredicted RBP6.34□□□□□ -1.39
HDAC8-212ENST00000421523 JPH1Q9HDC5 661 aaPredicted RBP6.34□□□□□ -1.39
HDAC8-212ENST00000421523 ANO2Q9NQ90 1003 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 RBM28Q9NW13 759 aaKnown RBP6.34□□□□□ -1.39
HDAC8-212ENST00000421523 MARCH5Q9NX47 278 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 BARHL2Q9NY43 387 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 SLC9A2Q9UBY0 812 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 INVSQ9Y283 1065 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 SSX2IPQ9Y2D8 614 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 FAN1Q9Y2M0 1017 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 MRPS23Q9Y3D9 190 aaKnown RBP6.34□□□□□ -1.39
HDAC8-212ENST00000421523 V9GY48 417 aaPredicted RBP6.34□□□□□ -1.39
HDAC8-212ENST00000421523 COL6A6A6NMZ7 2263 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 PLXNB3Q9ULL4 1909 aa6.34□□□□□ -1.39
HDAC8-212ENST00000421523 NID2Q14112 1375 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 ZMYM2Q9UBW7 1377 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 PDCD11Q14690 1871 aaKnown RBP6.33□□□□□ -1.4
HDAC8-212ENST00000421523 CCDC194A0A1B0GVG4 234 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 ESYT2A0FGR8 921 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 SMCO2A6NFE2 343 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 SPDYE3A6NKU9 549 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 FAM86B1E9PN63 330 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 hCG_1984214I3L0E3 225 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 NRG2O14511 850 aaPredicted RBP6.33□□□□□ -1.4
HDAC8-212ENST00000421523 NRP1O14786 923 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 MEFVO15553 781 aaPredicted RBP6.33□□□□□ -1.4
HDAC8-212ENST00000421523 SLC28A2O43868 658 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 XYLBO75191 536 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 CSDE1O75534 798 aaKnown RBP6.33□□□□□ -1.4
HDAC8-212ENST00000421523 AKAP3O75969 853 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 RHOBTB1O94844 696 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 FOSP01100 380 aaPredicted RBP6.33□□□□□ -1.4
HDAC8-212ENST00000421523 C8AP07357 584 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 CYP3A4P08684 503 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 FAM86B2P0C5J1 330 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 FCARP24071 287 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 PHKA2P46019 1235 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 STAT5BP51692 787 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 CLCN3P51790 818 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 AFF1P51825 1210 aaKnown RBP6.33□□□□□ -1.4
HDAC8-212ENST00000421523 EVCP57679 992 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 NLRP11P59045 1033 aaKnown RBP6.33□□□□□ -1.4
HDAC8-212ENST00000421523 CYP4F3Q08477 520 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 AP3B2Q13367 1082 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 NTRK3Q16288 839 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 SLC5A9Q2M3M2 681 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 COLEC12Q5KU26 742 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 TWF2Q6IBS0 349 aaKnown RBP6.33□□□□□ -1.4
HDAC8-212ENST00000421523 PPP1R18Q6NYC8 613 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 TRMT1LQ7Z2T5 733 aaKnown RBP6.33□□□□□ -1.4
HDAC8-212ENST00000421523 CYP2U1Q7Z449 544 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 HEATR3Q7Z4Q2 680 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 PIP4P1Q86T03 277 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 MARCH9Q86YJ5 346 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 ZNF713Q8N859 430 aaPredicted RBP6.33□□□□□ -1.4
HDAC8-212ENST00000421523 TTC8Q8TAM2 541 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 FAM200AQ8TCP9 573 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 URGCPQ8TCY9 931 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 ELSPBP1Q96BH3 223 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 PGBD1Q96JS3 809 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 FAM193BQ96PV7 902 aaPredicted RBP6.33□□□□□ -1.4
HDAC8-212ENST00000421523 HHIPQ96QV1 700 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 ANO3Q9BYT9 981 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 ZMYND12Q9H0C1 365 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 CHST12Q9NRB3 414 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 POLR3BQ9NW08 1133 aaPredicted RBP6.33□□□□□ -1.4
HDAC8-212ENST00000421523 DACT1Q9NYF0 836 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 AKT3Q9Y243 479 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 COL5A1P20908 1838 aaPredicted RBP6.33□□□□□ -1.4
HDAC8-212ENST00000421523 NOTCH4Q99466 2003 aa6.33□□□□□ -1.4
HDAC8-212ENST00000421523 ZBTB43O43298 467 aa6.32□□□□□ -1.4
HDAC8-212ENST00000421523 OFD1O75665 1012 aa6.32□□□□□ -1.4
HDAC8-212ENST00000421523 POMCP01189 267 aa6.32□□□□□ -1.4
HDAC8-212ENST00000421523 ALDH2P05091 517 aa6.32□□□□□ -1.4
HDAC8-212ENST00000421523 HNRNPA1P09651 372 aaKnown RBP eCLIP6.32□□□□□ -1.4
HDAC8-212ENST00000421523 FTH1P19P0C7X4 201 aa6.32□□□□□ -1.4
HDAC8-212ENST00000421523 EIF4BP23588 611 aaKnown RBP6.32□□□□□ -1.4
HDAC8-212ENST00000421523 CIITAP33076 1130 aa6.32□□□□□ -1.4
HDAC8-212ENST00000421523 HSPA4P34932 840 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms