RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 DBR1Q9UK59 544 aaKnown RBP8.4□□□□□ -1.06
AC012560.1-202ENST00000421324 EVPLQ92817 2033 aa8.4□□□□□ -1.06
AC012560.1-202ENST00000421324 LAMA3Q16787 3333 aa8.4□□□□□ -1.07
AC012560.1-202ENST00000421324 ADGRA3Q8IWK6 1321 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 VPS37CA5D8V6 355 aaPredicted RBP8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 ARHGEF35A5YM69 484 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 EPOPA6NHQ4 379 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 K7ELQ4 463 aaPredicted RBP8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 EOMESO95936 686 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 BMP15O95972 392 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 RB1P06400 928 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 HSP90AA1P07900 732 aaKnown RBP8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 FGFR4P22455 802 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 CTNNB1P35222 781 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 RARRES1P49788 294 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 GPM6BQ13491 265 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 PTPROQ16827 1216 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 PAN2Q504Q3 1202 aaKnown RBP8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 SPOUT1Q5T280 376 aaKnown RBP8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 SPRED2Q7Z698 418 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 BTLAQ7Z6A9 289 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 FERMT3Q86UX7 667 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 ABI1Q8IZP0 508 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 KCTD17Q8N5Z5 321 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 IGSF22Q8N9C0 903 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 RNF149Q8NC42 400 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 RNF169Q8NCN4 708 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 MCPH1Q8NEM0 835 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 C11orf84Q9BUA3 381 aaPredicted RBP8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 IFT122Q9HBG6 1241 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 DNM3Q9UQ16 869 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 MTCH2Q9Y6C9 303 aa8.39□□□□□ -1.07
AC012560.1-202ENST00000421324 MICAL3Q7RTP6 2002 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 A0A0U1RQF3 1178 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 TBKBP1A7MCY6 615 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 H3BNC9 293 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 USO1O60763 962 aaKnown RBP8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 ERLIN2O94905 339 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 ATP2C1P98194 919 aaPredicted RBP8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 POU5F1BQ06416 359 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 PCBP1Q15365 356 aaKnown RBP eCLIP8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 HIF1AQ16665 826 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 SWI5Q1ZZU3 235 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 FAM102BQ5T8I3 360 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 ARL6IP4Q66PJ3 421 aaKnown RBP8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 TWF2Q6IBS0 349 aaKnown RBP8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 MAEAQ7L5Y9 396 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 SYT9Q86SS6 491 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 ECHDC2Q86YB7 292 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 HSCBQ8IWL3 235 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 SNX29Q8TEQ0 813 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 GDPD5Q8WTR4 605 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 CLP1Q92989 425 aaKnown RBP8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 SNX21Q969T3 373 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 PLVAPQ9BX97 442 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 POLR3FQ9H1D9 316 aaPredicted RBP8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 XPNPEP1Q9NQW7 623 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 PIN4Q9Y237 131 aaKnown RBP8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 PCDHB12Q9Y5F1 795 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 GBF1Q92538 1859 aa8.38□□□□□ -1.07
AC012560.1-202ENST00000421324 TTC3P53804 2025 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 WDR81Q562E7 1941 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 VWA3AA6NCI4 1184 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 C5orf67F2Z3F1 127 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 INO80B-WBP1J3KQ70 363 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 LPXNO60711 386 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 SIN3BO75182 1162 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 FGFR1P11362 822 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 PDIA4P13667 645 aaKnown RBP8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 CYP11B2P19099 503 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 SYT1P21579 422 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 CDC25AP30304 524 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 ARL2P36404 184 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 GATMP50440 423 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 RAB27AP51159 221 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 PTENP60484 403 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 ZRSR1Q15695 479 aaKnown RBP8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 IL17AQ16552 155 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 OCLNQ16625 522 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 NAALADL2Q58DX5 795 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 STK32AQ8WU08 396 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 PGBD4Q96DM1 585 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 MRPL38Q96DV4 380 aaKnown RBP8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 MYO19Q96H55 970 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 CDK5RAP3Q96JB5 506 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 TRAIPQ9BWF2 469 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 TMEM117Q9H0C3 514 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 BHMT2Q9H2M3 363 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 RC3H2Q9HBD1 1191 aaKnown RBP8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 DDX19AQ9NUU7 478 aaKnown RBP8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 TYW1Q9NV66 732 aaKnown RBP8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 MKL2Q9ULH7 1088 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 MRPL42Q9Y6G3 142 aaKnown RBP8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 SZT2Q5T011 3432 aa8.37□□□□□ -1.07
AC012560.1-202ENST00000421324 LRRIQ4A6NIV6 560 aa8.36□□□□□ -1.07
AC012560.1-202ENST00000421324 PP2D1A8MPX8 630 aa8.36□□□□□ -1.07
AC012560.1-202ENST00000421324 TGFBR3LH3BV60 316 aa8.36□□□□□ -1.07
AC012560.1-202ENST00000421324 ZNF623O75123 536 aa8.36□□□□□ -1.07
AC012560.1-202ENST00000421324 EYA4O95677 639 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms