RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 HASPINQ8TF76 798 aa23.42■■□□□ 1.34
PTPN4-202ENST00000420482 RABGGTAQ92696 567 aa23.42■■□□□ 1.34
PTPN4-202ENST00000420482 ASIC4Q96FT7 647 aa23.42■■□□□ 1.34
PTPN4-202ENST00000420482 B3GALT6Q96L58 329 aa23.42■■□□□ 1.34
PTPN4-202ENST00000420482 AK8Q96MA6 479 aa23.42■■□□□ 1.34
PTPN4-202ENST00000420482 TBC1D32Q96NH3 1257 aa23.42■■□□□ 1.34
PTPN4-202ENST00000420482 MMTAG2Q9BU76 263 aaKnown RBP23.42■■□□□ 1.34
PTPN4-202ENST00000420482 ARHGAP28Q9P2N2 729 aa23.42■■□□□ 1.34
PTPN4-202ENST00000420482 USP20Q9Y2K6 914 aa23.42■■□□□ 1.34
PTPN4-202ENST00000420482 TRAPPC3O43617 180 aa23.41■■□□□ 1.34
PTPN4-202ENST00000420482 KIF4AO95239 1232 aa23.41■■□□□ 1.34
PTPN4-202ENST00000420482 EDN1P05305 212 aa23.41■■□□□ 1.34
PTPN4-202ENST00000420482 GRM5P41594 1212 aa23.41■■□□□ 1.34
PTPN4-202ENST00000420482 IER5LQ5T953 404 aa23.41■■□□□ 1.34
PTPN4-202ENST00000420482 SMG7Q92540 1137 aaKnown RBP23.41■■□□□ 1.34
PTPN4-202ENST00000420482 CALML4Q96GE6 196 aa23.41■■□□□ 1.34
PTPN4-202ENST00000420482 ACO2Q99798 780 aaKnown RBP23.41■■□□□ 1.34
PTPN4-202ENST00000420482 PAAF1Q9BRP4 392 aa23.41■■□□□ 1.34
PTPN4-202ENST00000420482 RUSC1Q9BVN2 902 aa23.41■■□□□ 1.34
PTPN4-202ENST00000420482 SLC38A7Q9NVC3 462 aa23.41■■□□□ 1.34
PTPN4-202ENST00000420482 H0YCG3 227 aa23.4■■□□□ 1.34
PTPN4-202ENST00000420482 TGM5O43548 720 aa23.4■■□□□ 1.34
PTPN4-202ENST00000420482 CD2BP2O95400 341 aaKnown RBP23.4■■□□□ 1.34
PTPN4-202ENST00000420482 PSMD5Q16401 504 aa23.4■■□□□ 1.34
PTPN4-202ENST00000420482 LIN9Q5TKA1 542 aa23.4■■□□□ 1.34
PTPN4-202ENST00000420482 DCLRE1AQ6PJP8 1040 aa23.4■■□□□ 1.34
PTPN4-202ENST00000420482 BRAPQ7Z569 592 aa23.4■■□□□ 1.34
PTPN4-202ENST00000420482 GLYCTKQ8IVS8 523 aa23.4■■□□□ 1.34
PTPN4-202ENST00000420482 SYT2Q8N9I0 419 aaPredicted RBP23.4■■□□□ 1.34
PTPN4-202ENST00000420482 PIK3R5Q8WYR1 880 aa23.4■■□□□ 1.34
PTPN4-202ENST00000420482 NTPCRQ9BSD7 190 aaKnown RBP23.4■■□□□ 1.34
PTPN4-202ENST00000420482 WDR6Q9NNW5 1121 aaKnown RBP23.4■■□□□ 1.34
PTPN4-202ENST00000420482 CLUHO75153 1309 aa23.39■■□□□ 1.34
PTPN4-202ENST00000420482 TMEM189-UBE2V1I3L0A0 370 aa23.39■■□□□ 1.33
PTPN4-202ENST00000420482 BRD1O95696 1058 aa23.39■■□□□ 1.33
PTPN4-202ENST00000420482 ASGR2P07307 311 aa23.39■■□□□ 1.33
PTPN4-202ENST00000420482 SPATA31D3P0C874 917 aa23.39■■□□□ 1.33
PTPN4-202ENST00000420482 MCF2P10911 925 aa23.39■■□□□ 1.33
PTPN4-202ENST00000420482 PLS3P13797 630 aa23.39■■□□□ 1.33
PTPN4-202ENST00000420482 UBA7P41226 1012 aa23.39■■□□□ 1.33
PTPN4-202ENST00000420482 NAB2Q15742 525 aa23.39■■□□□ 1.33
PTPN4-202ENST00000420482 RTP2Q5QGT7 225 aa23.39■■□□□ 1.33
PTPN4-202ENST00000420482 PRSS55Q6UWB4 352 aaPredicted RBP23.39■■□□□ 1.33
PTPN4-202ENST00000420482 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.39■■□□□ 1.33
PTPN4-202ENST00000420482 SPATA31D4Q6ZUB0 917 aa23.39■■□□□ 1.33
PTPN4-202ENST00000420482 KCNK18Q7Z418 384 aa23.39■■□□□ 1.33
PTPN4-202ENST00000420482 DAW1Q8N136 415 aa23.39■■□□□ 1.33
PTPN4-202ENST00000420482 SPIRE2Q8WWL2 714 aa23.39■■□□□ 1.33
PTPN4-202ENST00000420482 CDT1Q9H211 546 aa23.39■■□□□ 1.33
PTPN4-202ENST00000420482 IGSF9Q9P2J2 1179 aa23.39■■□□□ 1.33
PTPN4-202ENST00000420482 LARSQ9P2J5 1176 aaKnown RBP23.39■■□□□ 1.33
PTPN4-202ENST00000420482 CACNG4Q9UBN1 327 aa23.39■■□□□ 1.33
PTPN4-202ENST00000420482 PLXNA3P51805 1871 aa23.39■■□□□ 1.33
PTPN4-202ENST00000420482 SLC16A4O15374 487 aa23.38■■□□□ 1.33
PTPN4-202ENST00000420482 B3GAT3O94766 335 aa23.38■■□□□ 1.33
PTPN4-202ENST00000420482 PDCP20941 246 aa23.38■■□□□ 1.33
PTPN4-202ENST00000420482 GBP2P32456 591 aaPredicted RBP23.38■■□□□ 1.33
PTPN4-202ENST00000420482 MAPK7Q13164 816 aa23.38■■□□□ 1.33
PTPN4-202ENST00000420482 GLRA4Q5JXX5 417 aa23.38■■□□□ 1.33
PTPN4-202ENST00000420482 LILRA6Q6PI73 481 aa23.38■■□□□ 1.33
PTPN4-202ENST00000420482 MPZL3Q6UWV2 235 aa23.38■■□□□ 1.33
PTPN4-202ENST00000420482 RASSF8Q8NHQ8 419 aa23.38■■□□□ 1.33
PTPN4-202ENST00000420482 DDX27Q96GQ7 796 aaKnown RBP23.38■■□□□ 1.33
PTPN4-202ENST00000420482 ACAP3Q96P50 834 aa23.38■■□□□ 1.33
PTPN4-202ENST00000420482 PPP1R10Q96QC0 940 aaKnown RBP23.38■■□□□ 1.33
PTPN4-202ENST00000420482 PHOX2BQ99453 314 aa23.38■■□□□ 1.33
PTPN4-202ENST00000420482 TARS2Q9BW92 718 aaKnown RBP23.38■■□□□ 1.33
PTPN4-202ENST00000420482 IRF2BPLQ9H1B7 796 aa23.38■■□□□ 1.33
PTPN4-202ENST00000420482 SFI1A8K8P3 1242 aa23.37■■□□□ 1.33
PTPN4-202ENST00000420482 RFPL2O75678 378 aa23.37■■□□□ 1.33
PTPN4-202ENST00000420482 PLA2G4BP0C869 781 aa23.37■■□□□ 1.33
PTPN4-202ENST00000420482 RPL17P18621 184 aaKnown RBP23.37■■□□□ 1.33
PTPN4-202ENST00000420482 SCP2P22307 547 aa23.37■■□□□ 1.33
PTPN4-202ENST00000420482 NUBP1P53384 320 aa23.37■■□□□ 1.33
PTPN4-202ENST00000420482 OSTNP61366 133 aa23.37■■□□□ 1.33
PTPN4-202ENST00000420482 RAD51AP2Q09MP3 1159 aa23.37■■□□□ 1.33
PTPN4-202ENST00000420482 TCF15Q12870 199 aa23.37■■□□□ 1.33
PTPN4-202ENST00000420482 TDGQ13569 410 aa23.37■■□□□ 1.33
PTPN4-202ENST00000420482 LNX1Q8TBB1 728 aaPredicted RBP23.37■■□□□ 1.33
PTPN4-202ENST00000420482 PNMA5Q96PV4 448 aa23.37■■□□□ 1.33
PTPN4-202ENST00000420482 PRKD2Q9BZL6 878 aa23.37■■□□□ 1.33
PTPN4-202ENST00000420482 MFSD1Q9H3U5 465 aa23.37■■□□□ 1.33
PTPN4-202ENST00000420482 PTPRHQ9HD43 1115 aa23.37■■□□□ 1.33
PTPN4-202ENST00000420482 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.37■■□□□ 1.33
PTPN4-202ENST00000420482 C2orf16Q68DN1 1984 aa23.36■■□□□ 1.33
PTPN4-202ENST00000420482 SMIM28A0A1B0GU29 152 aa23.36■■□□□ 1.33
PTPN4-202ENST00000420482 TOM1L1O75674 476 aa23.36■■□□□ 1.33
PTPN4-202ENST00000420482 ZMYND10O75800 440 aa23.36■■□□□ 1.33
PTPN4-202ENST00000420482 PAPLNO95428 1278 aa23.36■■□□□ 1.33
PTPN4-202ENST00000420482 MYBP10242 640 aa23.36■■□□□ 1.33
PTPN4-202ENST00000420482 CLCNKBP51801 687 aa23.36■■□□□ 1.33
PTPN4-202ENST00000420482 NXPE3Q969Y0 559 aa23.36■■□□□ 1.33
PTPN4-202ENST00000420482 PLIN2Q99541 437 aa23.36■■□□□ 1.33
PTPN4-202ENST00000420482 HNRNPA1P09651 372 aaKnown RBP eCLIP23.35■■□□□ 1.33
PTPN4-202ENST00000420482 AVPR2P30518 371 aa23.35■■□□□ 1.33
PTPN4-202ENST00000420482 LONP1P36776 959 aaKnown RBP23.35■■□□□ 1.33
PTPN4-202ENST00000420482 SLC12A3P55017 1021 aa23.35■■□□□ 1.33
PTPN4-202ENST00000420482 VCPP55072 806 aaKnown RBP23.35■■□□□ 1.33
PTPN4-202ENST00000420482 UPP1Q16831 310 aa23.35■■□□□ 1.33
PTPN4-202ENST00000420482 TMEM119Q4V9L6 283 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms