RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 CDR2Q01850 454 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 MBTD1Q05BQ5 628 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 MAPK6Q16659 721 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 CFAP221Q4G0U5 840 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 DUSP28Q4G0W2 176 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 ZBTB41Q5SVQ8 909 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 BEND6Q5SZJ8 279 aaPredicted RBP9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 C11orf63Q6NUN7 778 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 MPZL3Q6UWV2 235 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 NT5DC3Q86UY8 548 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 ZNF677Q86XU0 584 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 RPUSD2Q8IZ73 545 aaKnown RBP9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 UBR7Q8N806 425 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 RNF149Q8NC42 400 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 SPATA4Q8NEY3 305 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 CAGE1Q8TC20 777 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 TATDN2Q93075 761 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 HES6Q96HZ4 224 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 ABHD16BQ9H3Z7 469 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 PDE11AQ9HCR9 933 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 ARFGAP3Q9NP61 516 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 C1orf112Q9NSG2 853 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 TAS2R14Q9NYV8 317 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 TMEM59LQ9UK28 342 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 CPSF3Q9UKF6 684 aaKnown RBP9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 TRPC6Q9Y210 931 aa9.75□□□□□ -0.85
LINCMD1-201ENST00000418518 TTLL13PA6NNM8 815 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 MAP2K7O14733 419 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 CLDN3O15551 220 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 CYP26A1O43174 497 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 B4GALT4O60513 344 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 PPFIA4O75335 1185 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 ITGBL1O95965 494 aaPredicted RBP9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 IGHA2P01877 340 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 CYP1A2P05177 515 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 CLTAP09496 248 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 INSRRP14616 1297 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 CYP11B1P15538 503 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 TNNI1P19237 187 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 ACO1P21399 889 aaKnown RBP9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 TBXAS1P24557 533 aaPredicted RBP9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 PIK3CAP42336 1068 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 PAFAH1B1P43034 410 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 ACOT2P49753 483 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 PDE6CP51160 858 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 NAP1L1P55209 391 aaKnown RBP9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 BPIFB4P59827 614 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 VSNL1P62760 191 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 RPS6KA1Q15418 735 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 GLE1Q53GS7 698 aaKnown RBP9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 MORN1Q5T089 497 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 CST9Q5W186 159 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 IQSEC1Q6DN90 963 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 RASAL3Q86YV0 1011 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 RASGEF1CQ8N431 466 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 LRRC71Q8N4P6 559 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 SLC35G2Q8TBE7 412 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 ACTRT1Q8TDG2 376 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 AFG1LQ8WV93 481 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 ARHGEF26Q96DR7 871 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 PCDHB18PQ96TA0 734 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 TINF2Q9BSI4 451 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 C16orf70Q9BSU1 422 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 FUT8Q9BYC5 575 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 UBXN6Q9BZV1 441 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 RNPEPQ9H4A4 650 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 RRAGCQ9HB90 399 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 ANKFY1Q9P2R3 1169 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 GTF3C4Q9UKN8 822 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 TTC7AQ9ULT0 858 aaPredicted RBP9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 TNFSF13BQ9Y275 285 aa9.74□□□□□ -0.85
LINCMD1-201ENST00000418518 MANSC4A6NHS7 340 aaPredicted RBP9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 BHMG1C9JSJ3 638 aaPredicted RBP9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 BUB1BO60566 1050 aaPredicted RBP9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 SEC31AO94979 1220 aaKnown RBP9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 ASS1P00966 412 aaKnown RBP9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 FTLP02792 175 aaPredicted RBP9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 MMP3P08254 477 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 RHOXF2BP0C7M4 288 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 ADCYAP1R1P41586 468 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 PHKA2P46019 1235 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 NOP2P46087 812 aaKnown RBP9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 CLCN3P51790 818 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 ZNF132P52740 706 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 NOP14P78316 857 aaKnown RBP9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 GPC5P78333 572 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 C2orf54Q08AI8 447 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 CUL2Q13617 745 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 AMHR2Q16671 573 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 LONRF2Q1L5Z9 754 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 CLEC16AQ2KHT3 1053 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 WDR44Q5JSH3 913 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 CCDC181Q5TID7 509 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 ATF7IP2Q5U623 682 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 EFCAB12Q6NXP0 572 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 PEX26Q7Z412 305 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 SLC47A2Q86VL8 602 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 DNAAF5Q86Y56 855 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 USP38Q8NB14 1042 aa9.73□□□□□ -0.85
LINCMD1-201ENST00000418518 NPLOC4Q8TAT6 608 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms