RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 FEM1BQ9UK73 627 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 DIS3Q9Y2L1 958 aaKnown RBP12.72□□□□□ -0.37
LIMK1-202ENST00000418310 UBE4BO95155 1302 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 SPATA31A6Q5VVP1 1343 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 SLX4Q8IY92 1834 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 TCP11X1B4DZS4 312 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 ITGA8P53708 1063 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 SMTNP53814 917 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 ATP13A4Q4VNC1 1196 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 ATRNL1Q5VV63 1379 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 NUGGCQ68CJ6 796 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 SCARA3Q6AZY7 606 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 CYB5D1Q6P9G0 228 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 RSBN1LQ6PCB5 846 aaPredicted RBP12.72□□□□□ -0.37
LIMK1-202ENST00000418310 GSTA5Q7RTV2 222 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 ADGRA3Q8IWK6 1321 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 HELQQ8TDG4 1101 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 CLEC4DQ8WXI8 215 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 AKT1S1Q96B36 256 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 FAM212AQ96EL1 285 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 WNT8AQ9H1J5 351 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 ANKFY1Q9P2R3 1169 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 THSD7AQ9UPZ6 1657 aa12.72□□□□□ -0.37
LIMK1-202ENST00000418310 NRXN2Q9P2S2 1712 aa12.71□□□□□ -0.37
LIMK1-202ENST00000418310 THAP12O43422 761 aa12.71□□□□□ -0.37
LIMK1-202ENST00000418310 EGFRP00533 1210 aa12.71□□□□□ -0.37
LIMK1-202ENST00000418310 ICAM1P05362 532 aa12.71□□□□□ -0.37
LIMK1-202ENST00000418310 CTNNA2P26232 953 aa12.71□□□□□ -0.37
LIMK1-202ENST00000418310 WNT7BP56706 349 aa12.71□□□□□ -0.37
LIMK1-202ENST00000418310 TRAF1Q13077 416 aa12.71□□□□□ -0.37
LIMK1-202ENST00000418310 MTERF2Q49AM1 385 aa12.71□□□□□ -0.37
LIMK1-202ENST00000418310 SWSAP1Q6NVH7 229 aa12.71□□□□□ -0.37
LIMK1-202ENST00000418310 B3GNT9Q6UX72 402 aa12.71□□□□□ -0.37
LIMK1-202ENST00000418310 ANO5Q75V66 913 aa12.71□□□□□ -0.37
LIMK1-202ENST00000418310 FAM160B2Q86V87 743 aa12.71□□□□□ -0.37
LIMK1-202ENST00000418310 EXOC3L1Q86VI1 746 aa12.71□□□□□ -0.37
LIMK1-202ENST00000418310 SRRM1Q8IYB3 904 aaKnown RBP12.71□□□□□ -0.37
LIMK1-202ENST00000418310 KIF2BQ8N4N8 673 aa12.71□□□□□ -0.37
LIMK1-202ENST00000418310 ATXN2LQ8WWM7 1075 aaKnown RBP12.71□□□□□ -0.37
LIMK1-202ENST00000418310 ZNF668Q96K58 619 aaPredicted RBP12.71□□□□□ -0.37
LIMK1-202ENST00000418310 KCND2Q9NZV8 630 aa12.71□□□□□ -0.37
LIMK1-202ENST00000418310 RIPK3Q9Y572 518 aa12.71□□□□□ -0.37
LIMK1-202ENST00000418310 CNTNAP1P78357 1384 aa12.71□□□□□ -0.37
LIMK1-202ENST00000418310 TMEM120BA0PK00 339 aa12.71□□□□□ -0.38
LIMK1-202ENST00000418310 PODXLO00592 558 aa12.71□□□□□ -0.38
LIMK1-202ENST00000418310 PEX10O60683 326 aa12.71□□□□□ -0.38
LIMK1-202ENST00000418310 RALAP11233 206 aa12.71□□□□□ -0.38
LIMK1-202ENST00000418310 CDR2Q01850 454 aa12.71□□□□□ -0.38
LIMK1-202ENST00000418310 MTMR2Q13614 643 aa12.71□□□□□ -0.38
LIMK1-202ENST00000418310 NFIL3Q16649 462 aa12.71□□□□□ -0.38
LIMK1-202ENST00000418310 FAM47EQ6ZV65 393 aa12.71□□□□□ -0.38
LIMK1-202ENST00000418310 SUGP1Q8IWZ8 645 aaKnown RBP12.71□□□□□ -0.38
LIMK1-202ENST00000418310 KIRREL3Q8IZU9 778 aa12.71□□□□□ -0.38
LIMK1-202ENST00000418310 FUKQ8N0W3 1084 aa12.71□□□□□ -0.38
LIMK1-202ENST00000418310 C1orf131Q8NDD1 294 aaKnown RBP12.71□□□□□ -0.38
LIMK1-202ENST00000418310 TMEM161BQ8NDZ6 487 aa12.71□□□□□ -0.38
LIMK1-202ENST00000418310 SHC3Q92529 594 aa12.71□□□□□ -0.38
LIMK1-202ENST00000418310 CNOT10Q9H9A5 744 aaKnown RBP12.71□□□□□ -0.38
LIMK1-202ENST00000418310 C10orf71Q711Q0 1435 aa12.71□□□□□ -0.38
LIMK1-202ENST00000418310 ECM2O94769 699 aaPredicted RBP12.7□□□□□ -0.38
LIMK1-202ENST00000418310 NUDT17P0C025 328 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 KRT10P13645 584 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 ATF7P17544 494 aaPredicted RBP12.7□□□□□ -0.38
LIMK1-202ENST00000418310 BAATQ14032 418 aaPredicted RBP12.7□□□□□ -0.38
LIMK1-202ENST00000418310 SLC39A4Q6P5W5 647 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 ANKS4BQ8N8V4 417 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 CNKSR1Q969H4 720 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 ZBTB45Q96K62 511 aaPredicted RBP12.7□□□□□ -0.38
LIMK1-202ENST00000418310 GTF3C4Q9UKN8 822 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 PCDHA3Q9Y5H8 950 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 RPSAP08865 295 aaKnown RBP12.7□□□□□ -0.38
LIMK1-202ENST00000418310 MMP13P45452 471 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 GTF2BQ00403 316 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 ADCY2Q08462 1091 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 PGM5Q15124 567 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 SIX1Q15475 284 aaPredicted RBP12.7□□□□□ -0.38
LIMK1-202ENST00000418310 PPP2R5EQ16537 467 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 C6orf118Q5T5N4 469 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 SPIRE2Q8WWL2 714 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 TMEM143Q96AN5 459 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 MRIQ9BWK5 157 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 PCYOX1Q9UHG3 505 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 STK38LQ9Y2H1 464 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 ATAD5Q96QE3 1844 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 LRRC37AA6NMS7 1700 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 ONECUT3O60422 494 aaPredicted RBP12.7□□□□□ -0.38
LIMK1-202ENST00000418310 PSMC5P62195 406 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 ZKSCAN4Q969J2 545 aaPredicted RBP12.7□□□□□ -0.38
LIMK1-202ENST00000418310 ATG4CQ96DT6 458 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 ZNF317Q96PQ6 595 aaPredicted RBP12.7□□□□□ -0.38
LIMK1-202ENST00000418310 FNBP1Q96RU3 617 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 C1orf112Q9NSG2 853 aa12.7□□□□□ -0.38
LIMK1-202ENST00000418310 TPX2Q9ULW0 747 aaKnown RBP12.7□□□□□ -0.38
LIMK1-202ENST00000418310 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.7□□□□□ -0.38
LIMK1-202ENST00000418310 ZNF862O60290 1169 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 SPAG7O75391 227 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 ZSCAN5DPP0CG00 497 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 ATF2P15336 505 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 PRKG1Q13976 671 aa12.69□□□□□ -0.38
LIMK1-202ENST00000418310 ZBTB41Q5SVQ8 909 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms