RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 PTPRHQ9HD43 1115 aa20.24■□□□□ 0.83
VPS16-204ENST00000417508 WDR6Q9NNW5 1121 aaKnown RBP20.24■□□□□ 0.83
VPS16-204ENST00000417508 TOPORSQ9NS56 1045 aaPredicted RBP20.24■□□□□ 0.83
VPS16-204ENST00000417508 C2orf16Q68DN1 1984 aa20.24■□□□□ 0.83
VPS16-204ENST00000417508 PLXNA3P51805 1871 aa20.24■□□□□ 0.83
VPS16-204ENST00000417508 MYH11P35749 1972 aa20.23■□□□□ 0.83
VPS16-204ENST00000417508 TMEM189-UBE2V1I3L0A0 370 aa20.23■□□□□ 0.83
VPS16-204ENST00000417508 TGM5O43548 720 aa20.23■□□□□ 0.83
VPS16-204ENST00000417508 CD2BP2O95400 341 aaKnown RBP20.23■□□□□ 0.83
VPS16-204ENST00000417508 BRD1O95696 1058 aa20.23■□□□□ 0.83
VPS16-204ENST00000417508 BMP15O95972 392 aa20.23■□□□□ 0.83
VPS16-204ENST00000417508 GRM5P41594 1212 aa20.23■□□□□ 0.83
VPS16-204ENST00000417508 SMTNP53814 917 aa20.23■□□□□ 0.83
VPS16-204ENST00000417508 YARSP54577 528 aaKnown RBP20.23■□□□□ 0.83
VPS16-204ENST00000417508 FAM171A1Q5VUB5 890 aa20.23■□□□□ 0.83
VPS16-204ENST00000417508 KCNK18Q7Z418 384 aa20.23■□□□□ 0.83
VPS16-204ENST00000417508 CDK5RAP3Q96JB5 506 aa20.23■□□□□ 0.83
VPS16-204ENST00000417508 B3GALT6Q96L58 329 aa20.23■□□□□ 0.83
VPS16-204ENST00000417508 TBC1D32Q96NH3 1257 aa20.23■□□□□ 0.83
VPS16-204ENST00000417508 PPP1R10Q96QC0 940 aaKnown RBP20.23■□□□□ 0.83
VPS16-204ENST00000417508 RUSC1Q9BVN2 902 aa20.23■□□□□ 0.83
VPS16-204ENST00000417508 IGSF9Q9P2J2 1179 aa20.23■□□□□ 0.83
VPS16-204ENST00000417508 VWA3AA6NCI4 1184 aa20.22■□□□□ 0.83
VPS16-204ENST00000417508 TRAPPC3O43617 180 aa20.22■□□□□ 0.83
VPS16-204ENST00000417508 KIF4AO95239 1232 aa20.22■□□□□ 0.83
VPS16-204ENST00000417508 MCF2P10911 925 aa20.22■□□□□ 0.83
VPS16-204ENST00000417508 NHLH1Q02575 133 aa20.22■□□□□ 0.83
VPS16-204ENST00000417508 MAPK7Q13164 816 aa20.22■□□□□ 0.83
VPS16-204ENST00000417508 XKR4Q5GH76 650 aa20.22■□□□□ 0.83
VPS16-204ENST00000417508 RTP2Q5QGT7 225 aa20.22■□□□□ 0.83
VPS16-204ENST00000417508 ALKAL1Q6UXT8 129 aa20.22■□□□□ 0.83
VPS16-204ENST00000417508 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.22■□□□□ 0.83
VPS16-204ENST00000417508 LNX1Q8TBB1 728 aaPredicted RBP20.22■□□□□ 0.83
VPS16-204ENST00000417508 SMG7Q92540 1137 aaKnown RBP20.22■□□□□ 0.83
VPS16-204ENST00000417508 DDX27Q96GQ7 796 aaKnown RBP20.22■□□□□ 0.83
VPS16-204ENST00000417508 PNMA5Q96PV4 448 aa20.22■□□□□ 0.83
VPS16-204ENST00000417508 PRKD2Q9BZL6 878 aa20.22■□□□□ 0.83
VPS16-204ENST00000417508 SLC38A7Q9NVC3 462 aa20.22■□□□□ 0.83
VPS16-204ENST00000417508 SMIM28A0A1B0GU29 152 aa20.21■□□□□ 0.83
VPS16-204ENST00000417508 ASGR2P07307 311 aa20.21■□□□□ 0.83
VPS16-204ENST00000417508 SPATA31D3P0C874 917 aa20.21■□□□□ 0.83
VPS16-204ENST00000417508 PLS3P13797 630 aa20.21■□□□□ 0.83
VPS16-204ENST00000417508 AVPR2P30518 371 aa20.21■□□□□ 0.83
VPS16-204ENST00000417508 STRN3Q13033 797 aa20.21■□□□□ 0.83
VPS16-204ENST00000417508 ZRSR1Q15695 479 aaKnown RBP20.21■□□□□ 0.83
VPS16-204ENST00000417508 SPATA31D4Q6ZUB0 917 aa20.21■□□□□ 0.83
VPS16-204ENST00000417508 BRAPQ7Z569 592 aa20.21■□□□□ 0.83
VPS16-204ENST00000417508 CEP57Q86XR8 500 aa20.21■□□□□ 0.83
VPS16-204ENST00000417508 NXPE3Q969Y0 559 aa20.21■□□□□ 0.83
VPS16-204ENST00000417508 CLSTN3Q9BQT9 956 aa20.21■□□□□ 0.83
VPS16-204ENST00000417508 TCHPQ9BT92 498 aa20.21■□□□□ 0.83
VPS16-204ENST00000417508 IRF2BPLQ9H1B7 796 aa20.21■□□□□ 0.83
VPS16-204ENST00000417508 CDT1Q9H211 546 aa20.21■□□□□ 0.83
VPS16-204ENST00000417508 CXCL16Q9H2A7 254 aa20.21■□□□□ 0.83
VPS16-204ENST00000417508 PIDD1Q9HB75 910 aa20.21■□□□□ 0.83
VPS16-204ENST00000417508 CACNG4Q9UBN1 327 aa20.21■□□□□ 0.83
VPS16-204ENST00000417508 H0YCG3 227 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 SLC16A4O15374 487 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 RFPL2O75678 378 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 ZMYND10O75800 440 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 B3GAT3O94766 335 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 RPL17P18621 184 aaKnown RBP20.2■□□□□ 0.82
VPS16-204ENST00000417508 SCP2P22307 547 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 FGFR3P22607 806 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 PROZP22891 400 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 PTPN5P54829 565 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 TDGQ13569 410 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 PSMD5Q16401 504 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 UPP1Q16831 310 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 ZNF568Q3ZCX4 644 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 PRSS55Q6UWB4 352 aaPredicted RBP20.2■□□□□ 0.82
VPS16-204ENST00000417508 MPZL3Q6UWV2 235 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 RTL10Q7L3V2 364 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 TAS1R3Q7RTX0 852 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 FEZF2Q8TBJ5 459 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 HASPINQ8TF76 798 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 ZNF707Q96C28 371 aaPredicted RBP20.2■□□□□ 0.82
VPS16-204ENST00000417508 ACAP3Q96P50 834 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 TARS2Q9BW92 718 aaKnown RBP20.2■□□□□ 0.82
VPS16-204ENST00000417508 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.2■□□□□ 0.82
VPS16-204ENST00000417508 CITO14578 2027 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 CLUHO75153 1309 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 CACNA1HO95180 2353 aa20.2■□□□□ 0.82
VPS16-204ENST00000417508 SFI1A8K8P3 1242 aa20.19■□□□□ 0.82
VPS16-204ENST00000417508 HNRNPA1P09651 372 aaKnown RBP eCLIP20.19■□□□□ 0.82
VPS16-204ENST00000417508 PLA2G4BP0C869 781 aa20.19■□□□□ 0.82
VPS16-204ENST00000417508 SLC12A3P55017 1021 aa20.19■□□□□ 0.82
VPS16-204ENST00000417508 TMEM119Q4V9L6 283 aa20.19■□□□□ 0.82
VPS16-204ENST00000417508 IER5LQ5T953 404 aa20.19■□□□□ 0.82
VPS16-204ENST00000417508 GLYCTKQ8IVS8 523 aa20.19■□□□□ 0.82
VPS16-204ENST00000417508 KCNN1Q92952 543 aa20.19■□□□□ 0.82
VPS16-204ENST00000417508 CALML4Q96GE6 196 aa20.19■□□□□ 0.82
VPS16-204ENST00000417508 KCNK12Q9HB15 430 aa20.19■□□□□ 0.82
VPS16-204ENST00000417508 LARSQ9P2J5 1176 aaKnown RBP20.19■□□□□ 0.82
VPS16-204ENST00000417508 EPS15L1Q9UBC2 864 aa20.19■□□□□ 0.82
VPS16-204ENST00000417508 FBXW11Q9UKB1 542 aa20.19■□□□□ 0.82
VPS16-204ENST00000417508 TOM1L1O75674 476 aa20.18■□□□□ 0.82
VPS16-204ENST00000417508 KCNE1P15382 129 aa20.18■□□□□ 0.82
VPS16-204ENST00000417508 HOXA9P31269 272 aa20.18■□□□□ 0.82
VPS16-204ENST00000417508 GBP2P32456 591 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms