RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 SEMA4GQ9NTN9 838 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 BAHCC1Q9P281 2608 aa10.4□□□□□ -0.74
LINC01238-201ENST00000416204 LAMA1P25391 3075 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 CYP3A7-CYP3A51PA0A087WV96 503 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 TTLL13PA6NNM8 815 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 NCAM2O15394 837 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 NEFLP07196 543 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 RHOP08100 348 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 HOXB3P14651 431 aaPredicted RBP10.39□□□□□ -0.75
LINC01238-201ENST00000416204 LIG1P18858 919 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 CYP3A7P24462 503 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 RPS9P46781 194 aaKnown RBP10.39□□□□□ -0.75
LINC01238-201ENST00000416204 NCBP1Q09161 790 aaKnown RBP10.39□□□□□ -0.75
LINC01238-201ENST00000416204 COL9A2Q14055 689 aaPredicted RBP10.39□□□□□ -0.75
LINC01238-201ENST00000416204 SIM2Q14190 667 aaPredicted RBP10.39□□□□□ -0.75
LINC01238-201ENST00000416204 LAIR1Q6GTX8 287 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 PRR23CQ6ZRP0 262 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.39□□□□□ -0.75
LINC01238-201ENST00000416204 GPIHBP1Q8IV16 184 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 TPH2Q8IWU9 490 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 HACE1Q8IYU2 909 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 BLIDQ8IZY5 108 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 TCP11Q8WWU5 503 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 PIK3R5Q8WYR1 880 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 BRD9Q9H8M2 597 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 LMAN1LQ9HAT1 526 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 RBM12Q9NTZ6 932 aaKnown RBP10.39□□□□□ -0.75
LINC01238-201ENST00000416204 SNTG2Q9NY99 539 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 PCDHA4Q9UN74 947 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 KCNJ14Q9UNX9 436 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 CDY1Q9Y6F8 540 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 CEP295Q9C0D2 2601 aa10.39□□□□□ -0.75
LINC01238-201ENST00000416204 TDRD15B5MCY1 1934 aaKnown RBP10.39□□□□□ -0.75
LINC01238-201ENST00000416204 MTCL1Q9Y4B5 1905 aaKnown RBP10.39□□□□□ -0.75
LINC01238-201ENST00000416204 PTGESO14684 152 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 HRO43593 1189 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 MARCH6O60337 910 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 ECI2O75521 394 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 P4HBP07237 508 aaKnown RBP10.38□□□□□ -0.75
LINC01238-201ENST00000416204 FCARP24071 287 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 AXLP30530 894 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 VIPR2P41587 438 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 MAGEA9P43362 315 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 RCAN1P53805 252 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 ARPP19P56211 112 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 PPP2R5CQ13362 524 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 TUSC3Q13454 348 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 GAS6Q14393 721 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 SF3A2Q15428 464 aaKnown RBP10.38□□□□□ -0.75
LINC01238-201ENST00000416204 FAM78AQ5JUQ0 283 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 GLRA4Q5JXX5 417 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 N4BP2L1Q5TBK1 243 aaPredicted RBP10.38□□□□□ -0.75
LINC01238-201ENST00000416204 SLC27A1Q6PCB7 646 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 ZNF687Q8N1G0 1237 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 PIAS4Q8N2W9 510 aaPredicted RBP10.38□□□□□ -0.75
LINC01238-201ENST00000416204 TTC8Q8TAM2 541 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 CCDC51Q96ER9 411 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 ZSWIM3Q96MP5 696 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 CORO1BQ9BR76 489 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 RNF26Q9BY78 433 aaPredicted RBP10.38□□□□□ -0.75
LINC01238-201ENST00000416204 CHRDQ9H2X0 955 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 GPRC5CQ9NQ84 441 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 RXFP3Q9NSD7 469 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 C2orf42Q9NWW7 574 aa10.38□□□□□ -0.75
LINC01238-201ENST00000416204 MRPS17Q9Y2R5 130 aaKnown RBP10.38□□□□□ -0.75
LINC01238-201ENST00000416204 WDFY3Q8IZQ1 3526 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 M0R2N6 131 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 ASAP2O43150 1006 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 C1RP00736 705 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 RETP07949 1114 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 IFNAR1P17181 557 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 GJA1P17302 382 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 GLRA2P23416 452 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 TKTP29401 623 aaKnown RBP10.37□□□□□ -0.75
LINC01238-201ENST00000416204 GDI1P31150 447 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 SOX9P48436 509 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 TFDP1Q14186 410 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 KRT32Q14532 448 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 NPY5RQ15761 445 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 TMEM132AQ24JP5 1023 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 Q6ZS52 159 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 OTUD6AQ7L8S5 288 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 POTEDQ86YR6 584 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 NOSTRINQ8IVI9 506 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 CELF5Q8N6W0 485 aaKnown RBP10.37□□□□□ -0.75
LINC01238-201ENST00000416204 FAM3CQ92520 227 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 HAS1Q92839 578 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 NELL2Q99435 816 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 NOTCH4Q99466 2003 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 POLR3FQ9H1D9 316 aaPredicted RBP10.37□□□□□ -0.75
LINC01238-201ENST00000416204 SMOC1Q9H4F8 434 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 GOLGA2P5Q9HBQ8 144 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 KCNMB3Q9NPA1 279 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 GJB4Q9NTQ9 266 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 ANGPTL2Q9UKU9 493 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 KCNH3Q9ULD8 1083 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 GDAQ9Y2T3 454 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 PIAS3Q9Y6X2 628 aa10.37□□□□□ -0.75
LINC01238-201ENST00000416204 ATRXP46100 2492 aa10.36□□□□□ -0.75
LINC01238-201ENST00000416204 NCANO14594 1321 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms