RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 SFMBT2Q5VUG0 894 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 TRIM65Q6PJ69 517 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 SV2AQ7L0J3 742 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 CDR2LQ86X02 465 aaPredicted RBP15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 SYN2Q92777 582 aaPredicted RBP15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 ANKRD36BP1Q96IX9 119 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 POP1Q99575 1024 aaKnown RBP15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 DNAJC7Q99615 494 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 NLRC4Q9NPP4 1024 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 RAB20Q9NX57 234 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 PIN4Q9Y237 131 aaKnown RBP15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 MROH7Q68CQ1 1323 aa15.43■□□□□ 0.06
HMGA1P1-201ENST00000415560 FAM189A1O60320 539 aa15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 B4GALT4O60513 344 aa15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 SGPL1O95470 568 aa15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 TMEM191BP0C7N4 346 aa15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 UCHL3P15374 230 aa15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 HOXA11P31270 313 aaPredicted RBP15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 KCNJ6P48051 423 aa15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 LBX1P52954 281 aa15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 BIRC3Q13489 604 aa15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 FAM26DQ5JW98 314 aa15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 PDXDC1Q6P996 788 aa15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 FAM43BQ6ZT52 329 aaPredicted RBP15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 NT5DC4Q86YG4 428 aa15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 HACE1Q8IYU2 909 aa15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 TSPAN18Q96SJ8 248 aa15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 SENP6Q9GZR1 1112 aaPredicted RBP15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 GANQ9H2C0 597 aa15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 PLEKHA5Q9HAU0 1116 aa15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 TRMT13Q9NUP7 481 aaKnown RBP15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 APEX2Q9UBZ4 518 aa15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 PLAGL2Q9UPG8 496 aa15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 R3HCC1Q9Y3T6 440 aaKnown RBP15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 NOC2LQ9Y3T9 749 aaKnown RBP15.42■□□□□ 0.06
HMGA1P1-201ENST00000415560 RNF225M0QZC1 329 aaPredicted RBP15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 NOL4O94818 638 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 CHRNA1P02708 482 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 C4BPAP04003 597 aaKnown RBP15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 CTSHP09668 335 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 ACTN1P12814 892 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 HNRNPH3P31942 346 aaKnown RBP15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 STAT1P42224 750 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 CDK7P50613 346 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 MFAP3P55082 362 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 CDK17Q00537 523 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 MGAT3Q09327 533 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 NFX1Q12986 1120 aaKnown RBP15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 TRPC3Q13507 836 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 BFSP2Q13515 415 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 ENOX2Q16206 610 aaKnown RBP15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 ZACNQ401N2 412 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 ZBTB41Q5SVQ8 909 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 CAGE1Q8TC20 777 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 TMEM40Q8WWA1 233 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 ZNF516Q92618 1163 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 ZNF333Q96JL9 665 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 NT5C1BQ96P26 610 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 STK33Q9BYT3 514 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 IMPG2Q9BZV3 1241 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 TOPORSQ9NS56 1045 aaPredicted RBP15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 DNAJC12Q9UKB3 198 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 ST3GAL5Q9UNP4 418 aa15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 BZW2Q9Y6E2 419 aaKnown RBP15.41■□□□□ 0.06
HMGA1P1-201ENST00000415560 LRRC53A6NM62 1247 aa15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 HSPA1AP0DMV8 641 aaKnown RBP15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 HSPA1BP0DMV9 641 aaKnown RBP15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 FECHP22830 423 aa15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 CYLC1P35663 651 aaPredicted RBP15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 PAK2Q13177 524 aa15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 RAPGEF1Q13905 1077 aa15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 TWF2Q6IBS0 349 aaKnown RBP15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 C15orf39Q6ZRI6 1047 aa15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 ENOSF1Q7L5Y1 443 aa15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 FAM228AQ86W67 206 aa15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 CCDC170Q8IYT3 715 aa15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 LMO3Q8TAP4 145 aa15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 BAP1Q92560 729 aa15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 ARMC5Q96C12 935 aa15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 TRPV6Q9H1D0 765 aa15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 SIX2Q9NPC8 291 aa15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 UBE2TQ9NPD8 197 aaPredicted RBP15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 DERAQ9Y315 318 aa15.4■□□□□ 0.06
HMGA1P1-201ENST00000415560 LACTBL1A8MY62 500 aa15.39■□□□□ 0.05
HMGA1P1-201ENST00000415560 EPHB6O15197 1021 aa15.39■□□□□ 0.05
HMGA1P1-201ENST00000415560 ZSCAN12O43309 604 aa15.39■□□□□ 0.05
HMGA1P1-201ENST00000415560 IPO7O95373 1038 aaKnown RBP15.39■□□□□ 0.05
HMGA1P1-201ENST00000415560 CXCL8P10145 99 aa15.39■□□□□ 0.05
HMGA1P1-201ENST00000415560 SKIP12755 728 aa15.39■□□□□ 0.05
HMGA1P1-201ENST00000415560 FERP16591 822 aa15.39■□□□□ 0.05
HMGA1P1-201ENST00000415560 PIK3CAP42336 1068 aa15.39■□□□□ 0.05
HMGA1P1-201ENST00000415560 TFAMQ00059 246 aaKnown RBP15.39■□□□□ 0.05
HMGA1P1-201ENST00000415560 ASIC2Q16515 512 aa15.39■□□□□ 0.05
HMGA1P1-201ENST00000415560 MEA1Q16626 185 aa15.39■□□□□ 0.05
HMGA1P1-201ENST00000415560 SGSM1Q2NKQ1 1148 aa15.39■□□□□ 0.05
HMGA1P1-201ENST00000415560 TRIM71Q2Q1W2 868 aaKnown RBP15.39■□□□□ 0.05
HMGA1P1-201ENST00000415560 FBXO47Q5MNV8 452 aa15.39■□□□□ 0.05
HMGA1P1-201ENST00000415560 LMBRD2Q68DH5 695 aaPredicted RBP15.39■□□□□ 0.05
HMGA1P1-201ENST00000415560 IQCEQ6IPM2 695 aa15.39■□□□□ 0.05
HMGA1P1-201ENST00000415560 DPY19L2P1Q6NXN4 242 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms