RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 PPP1R9AQ9ULJ8 1098 aa8.34□□□□□ -1.07
SIK3-203ENST00000415541 A0A0J9YVX5 310 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 SPDYE2BA6NHP3 402 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 ENTPD3O75355 529 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 FTCDO95954 541 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 OAS1P00973 400 aaKnown RBP8.33□□□□□ -1.08
SIK3-203ENST00000415541 ZCCHC18P0CG32 403 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 SPDYE6P0CI01 402 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 SHMT1P34896 483 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 AP1B1Q10567 949 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 BTG3Q14201 252 aaPredicted RBP8.33□□□□□ -1.08
SIK3-203ENST00000415541 LRRC41Q15345 812 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 TRADDQ15628 312 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 C15orf52Q6ZUT6 534 aaKnown RBP8.33□□□□□ -1.08
SIK3-203ENST00000415541 GPBP1Q86WP2 473 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 MGARPQ8TDB4 240 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 FAM151AQ8WW52 585 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 NAP1L4Q99733 375 aaKnown RBP8.33□□□□□ -1.08
SIK3-203ENST00000415541 PABPC3Q9H361 631 aaKnown RBP8.33□□□□□ -1.08
SIK3-203ENST00000415541 CUEDC2Q9H467 287 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 JMJD4Q9H9V9 463 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 TIMMDC1Q9NPL8 285 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 ETNK2Q9NVF9 386 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 PTTG2Q9NZH5 202 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 THEGQ9P2T0 379 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 HERC5Q9UII4 1024 aaKnown RBP8.33□□□□□ -1.08
SIK3-203ENST00000415541 XIRP1Q702N8 1843 aaKnown RBP8.33□□□□□ -1.08
SIK3-203ENST00000415541 CCDC160A6NGH7 325 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 RASGRF2O14827 1237 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 LSM1O15116 133 aaKnown RBP8.33□□□□□ -1.08
SIK3-203ENST00000415541 WDR46O15213 610 aaKnown RBP8.33□□□□□ -1.08
SIK3-203ENST00000415541 PDE5AO76074 875 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 LCA5LO95447 670 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 AFPP02771 609 aaKnown RBP8.33□□□□□ -1.08
SIK3-203ENST00000415541 CCNFP41002 786 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 RCN1Q15293 331 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 CNGA2Q16280 664 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 SLC9C1Q4G0N8 1177 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 ANGEL2Q5VTE6 544 aaKnown RBP8.33□□□□□ -1.08
SIK3-203ENST00000415541 EXOC3L1Q86VI1 746 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 ZNF212Q9UDV6 495 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 CROTQ9UKG9 612 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 FAF1Q9UNN5 650 aaPredicted RBP8.33□□□□□ -1.08
SIK3-203ENST00000415541 GDAQ9Y2T3 454 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 CYTH3O43739 400 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 EIF2AK2P19525 551 aaKnown RBP8.33□□□□□ -1.08
SIK3-203ENST00000415541 HNRNPH3P31942 346 aaKnown RBP8.33□□□□□ -1.08
SIK3-203ENST00000415541 ACVR2BQ13705 512 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 CNNM4Q6P4Q7 775 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 C16orf87Q6PH81 154 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 UNC13DQ70J99 1090 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 DCAF4Q8WV16 495 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 DHTKD1Q96HY7 919 aaPredicted RBP8.33□□□□□ -1.08
SIK3-203ENST00000415541 INPP4AQ96PE3 977 aaPredicted RBP8.33□□□□□ -1.08
SIK3-203ENST00000415541 DEFB129Q9H1M3 183 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 DPH5Q9H2P9 285 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 RAVER2Q9HCJ3 691 aaKnown RBP8.33□□□□□ -1.08
SIK3-203ENST00000415541 PFDN4Q9NQP4 134 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 PARP2Q9UGN5 583 aa8.33□□□□□ -1.08
SIK3-203ENST00000415541 MYH14Q7Z406 1995 aaKnown RBP8.32□□□□□ -1.08
SIK3-203ENST00000415541 SSU72P8A0A1W2PR75 194 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 TMEM110-MUSTN1A8MSY1 372 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 BTBD19C9JJ37 291 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 ATP9BO43861 1147 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 ASMTLO95671 621 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 RNASELQ05823 741 aaKnown RBP8.32□□□□□ -1.08
SIK3-203ENST00000415541 MEI1Q5TIA1 1274 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 ARHGEF18Q6ZSZ5 1173 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 SDR16C5Q8N3Y7 309 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 SAMD3Q8N6K7 520 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 DQX1Q8TE96 717 aaKnown RBP8.32□□□□□ -1.08
SIK3-203ENST00000415541 ATP6V0A1Q93050 837 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 MCUR1Q96AQ8 359 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 POLR3CQ9BUI4 534 aaPredicted RBP8.32□□□□□ -1.08
SIK3-203ENST00000415541 SYNCQ9H7C4 482 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 AS3MTQ9HBK9 375 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 GAKO14976 1311 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 TOGARAM1Q9Y4F4 1720 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 ARHGEF35A5YM69 484 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 SMAPO00193 183 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 CAPN9O14815 690 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 FOSP01100 380 aaPredicted RBP8.32□□□□□ -1.08
SIK3-203ENST00000415541 S100A1P23297 94 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 NT5C2P49902 561 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 RTP1P59025 263 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 ATP2C1P98194 919 aaPredicted RBP8.32□□□□□ -1.08
SIK3-203ENST00000415541 SEPT6Q14141 434 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 SUPT20HL1Q3ZLR7 823 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 ARHGEF16Q5VV41 709 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 TMEM53Q6P2H8 277 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 B3GNT6Q6ZMB0 384 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 RRAGAQ7L523 313 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 ACTRT1Q8TDG2 376 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 RUNDC3BQ96NL0 473 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 ERGIC2Q96RQ1 377 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 TBC1D10AQ9BXI6 508 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 PITPNM3Q9BZ71 974 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 FAM198AQ9UFP1 575 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 ZNF180Q9UJW8 692 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 FZD1Q9UP38 647 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms