RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 SMG8Q8ND04 991 aaKnown RBP10.5□□□□□ -0.73
RIF1-202ENST00000414861 OR5B17Q8NGF7 314 aa10.5□□□□□ -0.73
RIF1-202ENST00000414861 SCLYQ96I15 445 aa10.5□□□□□ -0.73
RIF1-202ENST00000414861 FNBP1Q96RU3 617 aa10.5□□□□□ -0.73
RIF1-202ENST00000414861 CGRRF1Q99675 332 aa10.5□□□□□ -0.73
RIF1-202ENST00000414861 APOL6Q9BWW8 343 aa10.5□□□□□ -0.73
RIF1-202ENST00000414861 PPP1R12CQ9BZL4 782 aa10.5□□□□□ -0.73
RIF1-202ENST00000414861 TRIM6Q9C030 488 aaPredicted RBP10.5□□□□□ -0.73
RIF1-202ENST00000414861 RNF39Q9H2S5 420 aa10.5□□□□□ -0.73
RIF1-202ENST00000414861 FAM207AQ9NSI2 230 aaPredicted RBP10.5□□□□□ -0.73
RIF1-202ENST00000414861 SNTG2Q9NY99 539 aa10.5□□□□□ -0.73
RIF1-202ENST00000414861 IPPQ9Y573 584 aa10.5□□□□□ -0.73
RIF1-202ENST00000414861 MEIS3P2A8K0S8 358 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 RNF225M0QZC1 329 aaPredicted RBP10.49□□□□□ -0.73
RIF1-202ENST00000414861 RECQL4O94761 1208 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 NFICP08651 508 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 ACTN1P12814 892 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 SLC9A1P19634 815 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 DSC3Q14574 896 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 DPY19L2P1Q6NXN4 242 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 CCDC51Q96ER9 411 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 IFIH1Q9BYX4 1025 aaKnown RBP10.49□□□□□ -0.73
RIF1-202ENST00000414861 TTYH3Q9C0H2 523 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 RPF1Q9H9Y2 349 aaKnown RBP10.49□□□□□ -0.73
RIF1-202ENST00000414861 SQORQ9Y6N5 450 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 TTC26A0AVF1 554 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 LACTBL1A8MY62 500 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 TNNI1P19237 187 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 AKAP5P24588 427 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 PON1P27169 355 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 CYP2C18P33260 490 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 CCL23P55773 120 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 ENPEPQ07075 957 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 EXOC3L4Q17RC7 722 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 TCTN1Q2MV58 587 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 EPC2Q52LR7 807 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 TDRD10Q5VZ19 366 aaKnown RBP10.49□□□□□ -0.73
RIF1-202ENST00000414861 C15orf39Q6ZRI6 1047 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 SV2AQ7L0J3 742 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 CCDC186Q7Z3E2 898 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 USP38Q8NB14 1042 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 TAS1R2Q8TE23 839 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 LINC01599Q8WXQ3 324 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 ELMO3Q96BJ8 720 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 ACAP3Q96P50 834 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 LSM14BQ9BX40 385 aaKnown RBP10.49□□□□□ -0.73
RIF1-202ENST00000414861 MTMR12Q9C0I1 747 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 TMEM8AQ9HCN3 771 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 FAM105AQ9NUU6 356 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 RNF19AQ9NV58 838 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 PCDHB2Q9Y5E7 798 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 MICAL3Q7RTP6 2002 aa10.49□□□□□ -0.73
RIF1-202ENST00000414861 GTPBP10A4D1E9 387 aaKnown RBP10.48□□□□□ -0.73
RIF1-202ENST00000414861 NOL4O94818 638 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 FXR1P51114 621 aaKnown RBP eCLIP10.48□□□□□ -0.73
RIF1-202ENST00000414861 GBP6Q6ZN66 633 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 LMO3Q8TAP4 145 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 SEMA4DQ92854 862 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 SNX27Q96L92 541 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 PCMTD1Q96MG8 357 aaPredicted RBP10.48□□□□□ -0.73
RIF1-202ENST00000414861 ADAM2Q99965 735 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 CCDC94Q9BW85 323 aaPredicted RBP10.48□□□□□ -0.73
RIF1-202ENST00000414861 SIX2Q9NPC8 291 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.48□□□□□ -0.736e-8■■■■■ 74.3
RIF1-202ENST00000414861 CHST12Q9NRB3 414 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 SCN1AP35498 2009 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 C4BPAP04003 597 aaKnown RBP10.48□□□□□ -0.73
RIF1-202ENST00000414861 CLTBP09497 229 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 ATF7P17544 494 aaPredicted RBP10.48□□□□□ -0.73
RIF1-202ENST00000414861 ITGB8P26012 769 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 HSP90AA2PQ14568 343 aaPredicted RBP10.48□□□□□ -0.73
RIF1-202ENST00000414861 ZACNQ401N2 412 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 KRT39Q6A163 491 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 JADE1Q6IE81 842 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 TRIM65Q6PJ69 517 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 APBB1IPQ7Z5R6 666 aaPredicted RBP10.48□□□□□ -0.73
RIF1-202ENST00000414861 USP37Q86T82 979 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 WDR49Q8IV35 697 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 CPLX3Q8WVH0 158 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 INTS2Q9H0H0 1204 aaKnown RBP10.48□□□□□ -0.73
RIF1-202ENST00000414861 GANQ9H2C0 597 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 KLK14Q9P0G3 267 aa10.48□□□□□ -0.73
RIF1-202ENST00000414861 AJAP1Q9UKB5 411 aaPredicted RBP10.48□□□□□ -0.73
RIF1-202ENST00000414861 PMM2O15305 246 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 N4BP1O75113 896 aaKnown RBP10.47□□□□□ -0.73
RIF1-202ENST00000414861 IL18RAPO95256 599 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 VNN1O95497 513 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 PTMAP06454 111 aaKnown RBP10.47□□□□□ -0.73
RIF1-202ENST00000414861 ZSCAN20P17040 1043 aaPredicted RBP10.47□□□□□ -0.73
RIF1-202ENST00000414861 TRIM21P19474 475 aaKnown RBP10.47□□□□□ -0.73
RIF1-202ENST00000414861 IBSPP21815 317 aaPredicted RBP10.47□□□□□ -0.73
RIF1-202ENST00000414861 CASP14P31944 242 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 GTF2H1P32780 548 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 ADKP55263 362 aaKnown RBP10.47□□□□□ -0.73
RIF1-202ENST00000414861 TFAMQ00059 246 aaKnown RBP10.47□□□□□ -0.73
RIF1-202ENST00000414861 KYAT1Q16773 422 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 GLRA4Q5JXX5 417 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 GJB7Q6PEY0 223 aa10.47□□□□□ -0.73
RIF1-202ENST00000414861 RTN4RL1Q86UN2 441 aaPredicted RBP10.47□□□□□ -0.73
RIF1-202ENST00000414861 LPPQ93052 612 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms