RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 PRPF4BQ13523 1007 aaKnown RBP10.82□□□□□ -0.68
DDB1-202ENST00000414411 CATSPER4Q7RTX7 472 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 ACRBPQ8NEB7 543 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 CNOT6LQ96LI5 555 aaKnown RBP10.82□□□□□ -0.68
DDB1-202ENST00000414411 DNAJC7Q99615 494 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 MRPL4Q9BYD3 311 aaKnown RBP10.82□□□□□ -0.68
DDB1-202ENST00000414411 PPP1R12CQ9BZL4 782 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 ERVK-5Q9HDB9 667 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 AGPAT5Q9NUQ2 364 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 TYW1Q9NV66 732 aaKnown RBP10.82□□□□□ -0.68
DDB1-202ENST00000414411 PADI3Q9ULW8 664 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 TNFSF13BQ9Y275 285 aa10.82□□□□□ -0.68
DDB1-202ENST00000414411 LAMA2P24043 3122 aaKnown RBP10.81□□□□□ -0.68
DDB1-202ENST00000414411 PES1O00541 588 aaKnown RBP10.81□□□□□ -0.68
DDB1-202ENST00000414411 HNRNPDLO14979 420 aaKnown RBP10.81□□□□□ -0.68
DDB1-202ENST00000414411 GPR182O15218 404 aa10.81□□□□□ -0.68
DDB1-202ENST00000414411 TNRC18O15417 2968 aaPredicted RBP10.81□□□□□ -0.68
DDB1-202ENST00000414411 TOM1L1O75674 476 aa10.81□□□□□ -0.68
DDB1-202ENST00000414411 CXCL10P02778 98 aa10.81□□□□□ -0.68
DDB1-202ENST00000414411 CD52P31358 61 aa10.81□□□□□ -0.68
DDB1-202ENST00000414411 CCL23P55773 120 aa10.81□□□□□ -0.68
DDB1-202ENST00000414411 PPP2R3AQ06190 1150 aa10.81□□□□□ -0.68
DDB1-202ENST00000414411 C12orf56Q8IXR9 622 aa10.81□□□□□ -0.68
DDB1-202ENST00000414411 SYCP3Q8IZU3 236 aa10.81□□□□□ -0.68
DDB1-202ENST00000414411 OR8K1Q8NGG5 319 aa10.81□□□□□ -0.68
DDB1-202ENST00000414411 SCLYQ96I15 445 aa10.81□□□□□ -0.68
DDB1-202ENST00000414411 HTATIP2Q9BUP3 242 aa10.81□□□□□ -0.68
DDB1-202ENST00000414411 TANC1Q9C0D5 1861 aa10.81□□□□□ -0.68
DDB1-202ENST00000414411 TTYH3Q9C0H2 523 aa10.81□□□□□ -0.68
DDB1-202ENST00000414411 HAPLN2Q9GZV7 340 aa10.81□□□□□ -0.68
DDB1-202ENST00000414411 AGPAT3Q9NRZ7 376 aa10.81□□□□□ -0.68
DDB1-202ENST00000414411 DMAC2Q9NW81 257 aa10.81□□□□□ -0.68
DDB1-202ENST00000414411 CAPN11Q9UMQ6 739 aa10.81□□□□□ -0.68
DDB1-202ENST00000414411 LUC7L2Q9Y383 392 aaKnown RBP10.81□□□□□ -0.68
DDB1-202ENST00000414411 A0A0B4J269 797 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 ERLIN2O94905 339 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 AXLP30530 894 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 LRRC63Q05C16 580 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 NFIL3Q16649 462 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 EDRF1Q3B7T1 1238 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 PLEKHG4Q58EX7 1191 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 MIIPQ5JXC2 388 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 ATF7IP2Q5U623 682 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 EEF1DP3Q658K8 133 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 MFSD5Q6N075 450 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 FAM43BQ6ZT52 329 aaPredicted RBP10.8□□□□□ -0.68
DDB1-202ENST00000414411 SLC9A9Q8IVB4 645 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 ZC3H3Q8IXZ2 948 aaKnown RBP10.8□□□□□ -0.68
DDB1-202ENST00000414411 EEF2KMTQ96G04 330 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 CPB2Q96IY4 423 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 ZBTB45Q96K62 511 aaPredicted RBP10.8□□□□□ -0.68
DDB1-202ENST00000414411 PDZD7Q9H5P4 517 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 CHST12Q9NRB3 414 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 ARHGAP25P42331 645 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 LIG4P49917 911 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 NFX1Q12986 1120 aaKnown RBP10.8□□□□□ -0.68
DDB1-202ENST00000414411 MYBPC2Q14324 1141 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 DSC3Q14574 896 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 MEA1Q16626 185 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 SLFN12LQ6IEE8 588 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 HS2ST1Q7LGA3 356 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 GOLGA5Q8TBA6 731 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 BICD1Q96G01 975 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 MS4A3Q96HJ5 214 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 CHP1Q99653 195 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 IFIH1Q9BYX4 1025 aaKnown RBP10.8□□□□□ -0.68
DDB1-202ENST00000414411 PRDM5Q9NQX1 630 aaPredicted RBP10.8□□□□□ -0.68
DDB1-202ENST00000414411 ZNF446Q9NWS9 450 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 MYO1AQ9UBC5 1043 aa10.8□□□□□ -0.68
DDB1-202ENST00000414411 CLIC2O15247 247 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 CLDN3O15551 220 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 FAM189A1O60320 539 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 NDUFA10O95299 355 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 RAG1P15918 1043 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 GARTP22102 1010 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 RFC2P35250 354 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 MTIF2P46199 727 aaKnown RBP10.79□□□□□ -0.68
DDB1-202ENST00000414411 CLCN6P51797 869 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 FKBP3Q00688 224 aaKnown RBP10.79□□□□□ -0.68
DDB1-202ENST00000414411 MCL1Q07820 350 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 PAK2Q13177 524 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 FIGNQ5HY92 759 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 ZNF569Q5MCW4 686 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 UBXN11Q5T124 520 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 NOTUMQ6P988 496 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 WDR59Q6PJI9 974 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 LRRC55Q6ZSA7 311 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 RSRC2Q7L4I2 434 aaKnown RBP10.79□□□□□ -0.68
DDB1-202ENST00000414411 RTN4RL1Q86UN2 441 aaPredicted RBP10.79□□□□□ -0.68
DDB1-202ENST00000414411 CDR2LQ86X02 465 aaPredicted RBP10.79□□□□□ -0.68
DDB1-202ENST00000414411 DBF4BQ8NFT6 615 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 FBXL18Q96ME1 805 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 ERGIC2Q96RQ1 377 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 CBWD1Q9BRT8 395 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 NUP58Q9BVL2 599 aa10.79□□□□□ -0.68
DDB1-202ENST00000414411 REXO2Q9Y3B8 237 aaKnown RBP10.79□□□□□ -0.68
DDB1-202ENST00000414411 EPN1Q9Y6I3 576 aaPredicted RBP10.79□□□□□ -0.68
DDB1-202ENST00000414411 RANBP2P49792 3224 aaKnown RBP10.78□□□□□ -0.68
DDB1-202ENST00000414411 CALUO43852 315 aaPredicted RBP10.78□□□□□ -0.68
DDB1-202ENST00000414411 EVI5O60447 810 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms