RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 MIER3Q7Z3K6 550 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 NEK8Q86SG6 692 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 ZNF410Q86VK4 478 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 RHPN2Q8IUC4 686 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 KSR1Q8IVT5 923 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 RIN2Q8WYP3 895 aaPredicted RBP9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 RSPH1Q8WYR4 309 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 SLC5A5Q92911 643 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 RMDN1Q96DB5 314 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 RTP3Q9BQQ7 232 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 EMILIN2Q9BXX0 1053 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 TBC1D17Q9HA65 648 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 DDX25Q9UHL0 483 aaKnown RBP9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 CA14Q9ULX7 337 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 R4GN57 208 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 CLUHO75153 1309 aa9.2□□□□□ -0.94
UPF3AP1-201ENST00000413731 NOTCH4Q99466 2003 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 FAM205CA6NFA0 338 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 BTBD18B2RXH4 712 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 C2CD2LO14523 706 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 INPPL1O15357 1258 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 CCNT1O60563 726 aaKnown RBP9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 URODP06132 367 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 GCFC2P16383 781 aaKnown RBP9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 GBP2P32456 591 aaPredicted RBP9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 MMP16P51512 607 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 COPS2P61201 443 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 AGMOQ6ZNB7 445 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 C15orf39Q6ZRI6 1047 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 CMASQ8NFW8 434 aaPredicted RBP9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 URGCPQ8TCY9 931 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 KCNG4Q8TDN1 519 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 MYADMQ96S97 322 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 RIT2Q99578 217 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 NAP1L4Q99733 375 aaKnown RBP9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 MKNK1Q9BUB5 465 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 HERC2P3Q9BVR0 1158 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 NIFKQ9BYG3 293 aaKnown RBP9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 RSAD1Q9HA92 442 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 AGPAT5Q9NUQ2 364 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 IGSF9Q9P2J2 1179 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 SUCLA2Q9P2R7 463 aaPredicted RBP9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 SMC3Q9UQE7 1217 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 PRG3Q9Y2Y8 225 aaPredicted RBP9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 PCDHB2Q9Y5E7 798 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 DNAH14Q0VDD8 3507 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 TRIP11Q15643 1979 aa9.19□□□□□ -0.94
UPF3AP1-201ENST00000413731 F8W810 466 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 H3BQV1 296 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 TEX28O15482 410 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 SLC37A4O43826 429 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 MARCH6O60337 910 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 ICMTO60725 284 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 ZNF623O75123 536 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 RFPL2O75678 378 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 PSMD10O75832 226 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 POMCP01189 267 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 LMNAP02545 664 aaKnown RBP9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 SOD2P04179 222 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 TCF3P15923 654 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 GJB2P29033 226 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 XKR3Q5GH77 459 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 SPECC1Q5M775 1068 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 UBXN11Q5T124 520 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 MOXD1Q6UVY6 613 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 B3GNT9Q6UX72 402 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 TAS1R3Q7RTX0 852 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 TAS1R1Q7RTX1 841 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 HSCBQ8IWL3 235 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 KIAA2013Q8IYS2 634 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 RNF168Q8IYW5 571 aaPredicted RBP9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 ST13P5Q8NFI4 369 aaPredicted RBP9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 RDM1Q8NG50 284 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 SMG7Q92540 1137 aaKnown RBP9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 ZNF707Q96C28 371 aaPredicted RBP9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 TMEM175Q9BSA9 504 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 MINDY3Q9H8M7 445 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 IFT122Q9HBG6 1241 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 WDR6Q9NNW5 1121 aaKnown RBP9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 MRPL17Q9NRX2 175 aaKnown RBP9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 EPS15L1Q9UBC2 864 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 WNT16Q9UBV4 365 aa9.18□□□□□ -0.94
UPF3AP1-201ENST00000413731 CNTNAP2Q9UHC6 1331 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 CCDC195A0A1B0GUA6 201 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 K7ELQ4 463 aaPredicted RBP9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 NRP1O14786 923 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 MAFO75444 373 aaPredicted RBP9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 DKK1O94907 266 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 GLUD1P00367 558 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 ADH1AP07327 375 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 DCNP07585 359 aaKnown RBP9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 SRFP11831 508 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 ATP2B1P20020 1258 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 GLUD2P49448 558 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 DNM2P50570 870 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 OCLNQ16625 522 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 Q4G0T1 1027 aa9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 EARS2Q5JPH6 523 aaKnown RBP9.17□□□□□ -0.94
UPF3AP1-201ENST00000413731 MCTP1Q6DN14 999 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms