RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 LIX1LQ8IVB5 337 aa5.85□□□□□ -1.47
HMGB3P31-201ENST00000413333 OR2C3Q8N628 320 aa5.85□□□□□ -1.47
HMGB3P31-201ENST00000413333 LILRA3Q8N6C8 439 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P31-201ENST00000413333 ANKRD42Q8N9B4 389 aa5.85□□□□□ -1.47
HMGB3P31-201ENST00000413333 FBXO15Q8NCQ5 510 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P31-201ENST00000413333 DEPTORQ8TB45 409 aa5.85□□□□□ -1.47
HMGB3P31-201ENST00000413333 BRIX1Q8TDN6 353 aaKnown RBP5.85□□□□□ -1.47
HMGB3P31-201ENST00000413333 ANKS1AQ92625 1134 aa5.85□□□□□ -1.47
HMGB3P31-201ENST00000413333 CDC5LQ99459 802 aaKnown RBP5.85□□□□□ -1.47
HMGB3P31-201ENST00000413333 CARD11Q9BXL7 1154 aa5.85□□□□□ -1.47
HMGB3P31-201ENST00000413333 BTBD1Q9H0C5 482 aa5.85□□□□□ -1.47
HMGB3P31-201ENST00000413333 TMEM168Q9H0V1 697 aa5.85□□□□□ -1.47
HMGB3P31-201ENST00000413333 ARFGAP3Q9NP61 516 aa5.85□□□□□ -1.47
HMGB3P31-201ENST00000413333 SLAMF7Q9NQ25 335 aa5.85□□□□□ -1.47
HMGB3P31-201ENST00000413333 TRMT13Q9NUP7 481 aaKnown RBP5.85□□□□□ -1.47
HMGB3P31-201ENST00000413333 CTDP1Q9Y5B0 961 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P31-201ENST00000413333 CCDC189A1A4V9 331 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 POM121BA6NF01 834 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 GASTP01350 101 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 AHSGP02765 367 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 HALP42357 657 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 SUMO3P55854 103 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 BPIFB4P59827 614 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 CTXN1P60606 82 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 ATP8B2P98198 1209 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 FMO1Q01740 532 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 ZNF543Q08ER8 600 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 MTM1Q13496 603 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 CNGA2Q16280 664 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 PRAMEF14Q5SWL7 426 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 MCTP2Q6DN12 878 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 CNKSR3Q6P9H4 555 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 NBPF11Q86T75 865 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 PPP1R3BQ86XI6 285 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 CCDC33Q8N5R6 958 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 ANKRD53Q8N9V6 530 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 OR5M3Q8NGP4 307 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 OR14K1Q8NGZ2 314 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 KIAA1191Q96A73 305 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 SLC7A6OSQ96CW6 309 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 RPL10LQ96L21 214 aaKnown RBP5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 SIGLEC10Q96LC7 697 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 PWWP2AQ96N64 755 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 CRB3Q9BUF7 120 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 C1orf43Q9BWL3 253 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 WDCPQ9H6R7 721 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 CERS4Q9HA82 394 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 GPRC5BQ9NZH0 403 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 CPNE7Q9UBL6 633 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 CDC23Q9UJX2 597 aa5.84□□□□□ -1.47
HMGB3P31-201ENST00000413333 F2RL2O00254 374 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 RAP2AP10114 183 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 IL2RBP14784 551 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 NPR1P16066 1061 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 RPL17P18621 184 aaKnown RBP5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 ABCB4P21439 1286 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 PRDX5P30044 214 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 GUCY1A2P33402 732 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 CASRP41180 1078 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 USP10Q14694 798 aaKnown RBP5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 AGBL4Q5VU57 503 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 REXO1L1PQ8IX06 675 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 MYRIPQ8NFW9 859 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 TNPO1Q92973 898 aaKnown RBP5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 LPPQ93052 612 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 EVI5LQ96CN4 794 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 AJUBAQ96IF1 538 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 YTHDC1Q96MU7 727 aaKnown RBP5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 SELENOOQ9BVL4 669 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 KATNBL1Q9H079 304 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 OR10A2Q9H208 303 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 BARX1Q9HBU1 254 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 PNPLA8Q9NP80 782 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 SACM1LQ9NTJ5 587 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 PIH1D1Q9NWS0 290 aaKnown RBP5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 NTMQ9P121 344 aa5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P31-201ENST00000413333 NT5C1B-RDH14C9J2C7 533 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 MYO1FO00160 1098 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 ETV2O00321 342 aaPredicted RBP5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 TBX3O15119 743 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 JUNP05412 331 aaKnown RBP5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 CD1AP06126 327 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 FTH1P19P0C7X4 201 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 VSIG10L2P0DP72 767 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 HDCP19113 662 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 PI3P19957 117 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 PAX3P23760 479 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 CSF2RBP32927 897 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 PHKA1P46020 1223 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 KCNJ5P48544 419 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 IRAK1P51617 712 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 MAPK10P53779 464 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 SOX8P57073 446 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 CREMQ03060 361 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 TBR1Q16650 682 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 IZUMO3Q5VZ72 239 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 USP30Q70CQ3 517 aa5.82□□□□□ -1.48
HMGB3P31-201ENST00000413333 PDZD4Q76G19 769 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms