RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 STXBP2Q15833 593 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 CLEC16AQ2KHT3 1053 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 WDR44Q5JSH3 913 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 C15orf39Q6ZRI6 1047 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 TAS1R3Q7RTX0 852 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 OR2W6PQ8NHA6 318 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 DHX38Q92620 1227 aaKnown RBP12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 KLRG1Q96E93 195 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 PLVAPQ9BX97 442 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 FAM107BQ9H098 131 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 PPP1R1BQ9UD71 204 aaPredicted RBP12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 CNOT8Q9UFF9 292 aaKnown RBP12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 TELO2Q9Y4R8 837 aa12.32□□□□□ -0.44
TRAFD1-202ENST00000412615 PARP14Q460N5 1801 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 ZEB2O60315 1214 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 MDH1P40925 334 aaKnown RBP12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 EIF3BP55884 814 aaKnown RBP12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 BPIFB4P59827 614 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 EMC2Q15006 297 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 PSMD6Q15008 389 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 AGBL2Q5U5Z8 902 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 ZNF677Q86XU0 584 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 KCNN1Q92952 543 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 C18orf8Q96DM3 657 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 ZDHHC18Q9NUE0 388 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 PARP2Q9UGN5 583 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 PHIPQ8WWQ0 1821 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 MYO1FO00160 1098 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 TNNI1P19237 187 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 ICAM3P32942 547 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 LSP1P33241 339 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 CYP1B1Q16678 543 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 SLFN12LQ6IEE8 588 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 CCDC137Q6PK04 289 aaKnown RBP12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 SLC13A5Q86YT5 568 aaPredicted RBP12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 DNERQ8NFT8 737 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 PSPC1Q8WXF1 523 aaKnown RBP12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 ZNF516Q92618 1163 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 PI4K2AQ9BTU6 479 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 TXLNGYQ9BZA5 131 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 ZNF302Q9NR11 478 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 FZD1Q9UP38 647 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 ATP8A1Q9Y2Q0 1164 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 SNX24Q9Y343 169 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 PCDHB2Q9Y5E7 798 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 MAFBQ9Y5Q3 323 aaPredicted RBP12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 STYXL1Q9Y6J8 313 aa12.31□□□□□ -0.44
TRAFD1-202ENST00000412615 SPDYE16A6NNV3 312 aaPredicted RBP12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 NDUFAB1O14561 156 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 ATG7O95352 703 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 GUCY1A3Q02108 690 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 IFFO1Q0D2I5 559 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 ZACNQ401N2 412 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 BTBD6Q96KE9 485 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 EPN3Q9H201 632 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 BCCIPQ9P287 314 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 AGO2Q9UKV8 859 aaKnown RBP12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 SRRM3A6NNA2 597 aaPredicted RBP12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 SORBS3O60504 671 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 LDHAP00338 332 aaKnown RBP12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 OATP04181 439 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 UNGP13051 313 aaPredicted RBP12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 NAMPTP43490 491 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 PLTPP55058 493 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 SP2Q02086 613 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 KCTD19Q17RG1 926 aaPredicted RBP12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 CYFIP1Q7L576 1253 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 CHST13Q8NET6 341 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 DEPTORQ8TB45 409 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 TRIM11Q96F44 468 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 PORCNQ9H237 461 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 RABEP2Q9H5N1 569 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 AVENQ9NQS1 362 aaPredicted RBP12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 AFG3L2Q9Y4W6 797 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 RLFQ13129 1914 aa12.3□□□□□ -0.44
TRAFD1-202ENST00000412615 K7ERI5 159 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 C4BPAP04003 597 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 MYBL1P10243 752 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 MAPK4P31152 587 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 HPDP32754 393 aaPredicted RBP12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 CORO7P57737 925 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 IRX5P78411 483 aaPredicted RBP12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 ODF2Q5BJF6 829 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 NOL9Q5SY16 702 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 ZDHHC24Q6UX98 284 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 C10orf67Q8IYJ2 551 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 ZDHHC14Q8IZN3 488 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 SLC7A3Q8WY07 619 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 TMEM143Q96AN5 459 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 ELMO3Q96BJ8 720 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 DHX33Q9H6R0 707 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 MTRF1LQ9UGC7 380 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 FEZ2Q9UHY8 353 aaPredicted RBP12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 PPP2R3BQ9Y5P8 575 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 COL11A1P12107 1806 aaPredicted RBP12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 PIGRP01833 764 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 HLA-DRAP01903 254 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 ATP4AP20648 1035 aa12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 COILP38432 576 aaPredicted RBP12.29□□□□□ -0.44
TRAFD1-202ENST00000412615 FNTAP49354 379 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms