RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 SFR1Q86XK3 245 aa20.62■□□□□ 0.89
TRIM56-202ENST00000412507 RNF168Q8IYW5 571 aaPredicted RBP20.62■□□□□ 0.89
TRIM56-202ENST00000412507 TMEM87AQ8NBN3 555 aa20.62■□□□□ 0.89
TRIM56-202ENST00000412507 ACAP3Q96P50 834 aa20.62■□□□□ 0.89
TRIM56-202ENST00000412507 PPP1R10Q96QC0 940 aaKnown RBP20.62■□□□□ 0.89
TRIM56-202ENST00000412507 HAPLN2Q9GZV7 340 aa20.62■□□□□ 0.89
TRIM56-202ENST00000412507 TOPORSQ9NS56 1045 aaPredicted RBP20.62■□□□□ 0.89
TRIM56-202ENST00000412507 ADAM28Q9UKQ2 775 aa20.62■□□□□ 0.89
TRIM56-202ENST00000412507 TNFRSF10AO00220 468 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 C2CD2LO14523 706 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 SRGAP2BP0DMP2 458 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 SCP2P22307 547 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 ME1P48163 572 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 LIG4P49917 911 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 GTF2BQ00403 316 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 MCL1Q07820 350 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 COASYQ13057 564 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 SMAD4Q13485 552 aaKnown RBP20.61■□□□□ 0.89
TRIM56-202ENST00000412507 BECN1Q14457 450 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 E2F4Q16254 413 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 ZC2HC1CQ53FD0 456 aaPredicted RBP20.61■□□□□ 0.89
TRIM56-202ENST00000412507 FUT10Q6P4F1 479 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 ALKAL1Q6UXT8 129 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 TMEM184AQ6ZMB5 413 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 STAMQ92783 540 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 CHAMP1Q96JM3 812 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 GPR62Q9BZJ7 368 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 RCOR1Q9UKL0 485 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 FAM50BQ9Y247 325 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 HCFC2Q9Y5Z7 792 aa20.61■□□□□ 0.89
TRIM56-202ENST00000412507 SMIM28A0A1B0GU29 152 aa20.6■□□□□ 0.89
TRIM56-202ENST00000412507 HNRNPDLO14979 420 aaKnown RBP20.6■□□□□ 0.89
TRIM56-202ENST00000412507 LILRB3O75022 631 aa20.6■□□□□ 0.89
TRIM56-202ENST00000412507 TADA2AO75478 443 aa20.6■□□□□ 0.89
TRIM56-202ENST00000412507 URODP06132 367 aa20.6■□□□□ 0.89
TRIM56-202ENST00000412507 IDEP14735 1019 aa20.6■□□□□ 0.89
TRIM56-202ENST00000412507 XKR4Q5GH76 650 aa20.6■□□□□ 0.89
TRIM56-202ENST00000412507 ANKRD54Q6NXT1 300 aa20.6■□□□□ 0.89
TRIM56-202ENST00000412507 SMRP1Q8NCR6 262 aa20.6■□□□□ 0.89
TRIM56-202ENST00000412507 HASPINQ8TF76 798 aa20.6■□□□□ 0.89
TRIM56-202ENST00000412507 DHX58Q96C10 678 aa20.6■□□□□ 0.89
TRIM56-202ENST00000412507 B3GALT6Q96L58 329 aa20.6■□□□□ 0.89
TRIM56-202ENST00000412507 SNX27Q96L92 541 aa20.6■□□□□ 0.89
TRIM56-202ENST00000412507 MRPL17Q9NRX2 175 aaKnown RBP20.6■□□□□ 0.89
TRIM56-202ENST00000412507 TBC1D7Q9P0N9 293 aa20.6■□□□□ 0.89
TRIM56-202ENST00000412507 MEFVO15553 781 aaPredicted RBP20.59■□□□□ 0.89
TRIM56-202ENST00000412507 KIF4AO95239 1232 aa20.59■□□□□ 0.89
TRIM56-202ENST00000412507 PIGRP01833 764 aa20.59■□□□□ 0.89
TRIM56-202ENST00000412507 GAP43P17677 238 aa20.59■□□□□ 0.89
TRIM56-202ENST00000412507 GLUD2P49448 558 aa20.59■□□□□ 0.89
TRIM56-202ENST00000412507 SMAD2Q15796 467 aaKnown RBP20.59■□□□□ 0.89
TRIM56-202ENST00000412507 ZNF720Q7Z2F6 126 aa20.59■□□□□ 0.89
TRIM56-202ENST00000412507 CASP10Q92851 521 aa20.59■□□□□ 0.89
TRIM56-202ENST00000412507 ZMAT2Q96NC0 199 aaKnown RBP20.59■□□□□ 0.89
TRIM56-202ENST00000412507 KLHL5Q96PQ7 755 aa20.59■□□□□ 0.89
TRIM56-202ENST00000412507 APOL5Q9BWW9 433 aa20.59■□□□□ 0.89
TRIM56-202ENST00000412507 ST6GALNAC4Q9H4F1 302 aa20.59■□□□□ 0.89
TRIM56-202ENST00000412507 GOLGA2P5Q9HBQ8 144 aa20.59■□□□□ 0.89
TRIM56-202ENST00000412507 CNPP09543 421 aaKnown RBP20.58■□□□□ 0.89
TRIM56-202ENST00000412507 EPCAMP16422 314 aa20.58■□□□□ 0.89
TRIM56-202ENST00000412507 ABCD1P33897 745 aa20.58■□□□□ 0.89
TRIM56-202ENST00000412507 DSG1Q02413 1049 aa20.58■□□□□ 0.89
TRIM56-202ENST00000412507 SOX4Q06945 474 aaPredicted RBP20.58■□□□□ 0.89
TRIM56-202ENST00000412507 SLC10A6Q3KNW5 377 aa20.58■□□□□ 0.89
TRIM56-202ENST00000412507 USP41Q3LFD5 358 aa20.58■□□□□ 0.89
TRIM56-202ENST00000412507 KIAA0319Q5VV43 1072 aa20.58■□□□□ 0.89
TRIM56-202ENST00000412507 KIAA1841Q6NSI8 718 aa20.58■□□□□ 0.89
TRIM56-202ENST00000412507 SLC39A4Q6P5W5 647 aa20.58■□□□□ 0.89
TRIM56-202ENST00000412507 SYCE2Q6PIF2 218 aa20.58■□□□□ 0.89
TRIM56-202ENST00000412507 MAP4K3Q8IVH8 894 aa20.58■□□□□ 0.89
TRIM56-202ENST00000412507 SLC22A17Q8WUG5 538 aa20.58■□□□□ 0.89
TRIM56-202ENST00000412507 EMILIN2Q9BXX0 1053 aa20.58■□□□□ 0.89
TRIM56-202ENST00000412507 TNMDQ9H2S6 317 aa20.58■□□□□ 0.89
TRIM56-202ENST00000412507 MRPL44Q9H9J2 332 aaKnown RBP20.58■□□□□ 0.89
TRIM56-202ENST00000412507 CHST7Q9NS84 486 aa20.58■□□□□ 0.89
TRIM56-202ENST00000412507 SEL1LQ9UBV2 794 aa20.58■□□□□ 0.89
TRIM56-202ENST00000412507 SF3B1O75533 1304 aaKnown RBP eCLIP20.57■□□□□ 0.882e-6■■■■■ 84.7
TRIM56-202ENST00000412507 ANKRD63C9JTQ0 380 aa20.57■□□□□ 0.88
TRIM56-202ENST00000412507 CXCL8P10145 99 aa20.57■□□□□ 0.88
TRIM56-202ENST00000412507 IGFBP6P24592 240 aaPredicted RBP20.57■□□□□ 0.88
TRIM56-202ENST00000412507 KLRC2P26717 231 aa20.57■□□□□ 0.88
TRIM56-202ENST00000412507 TNFSF9P41273 254 aa20.57■□□□□ 0.88
TRIM56-202ENST00000412507 CLCNKBP51801 687 aa20.57■□□□□ 0.88
TRIM56-202ENST00000412507 HERC4Q5GLZ8 1057 aaPredicted RBP20.57■□□□□ 0.88
TRIM56-202ENST00000412507 RESP18Q5W5W9 173 aa20.57■□□□□ 0.88
TRIM56-202ENST00000412507 IQUBQ8NA54 791 aa20.57■□□□□ 0.88
TRIM56-202ENST00000412507 DOCK6Q96HP0 2047 aa20.57■□□□□ 0.88
TRIM56-202ENST00000412507 CUEDC2Q9H467 287 aa20.57■□□□□ 0.88
TRIM56-202ENST00000412507 CD320Q9NPF0 282 aa20.57■□□□□ 0.88
TRIM56-202ENST00000412507 PANK4Q9NVE7 773 aa20.57■□□□□ 0.88
TRIM56-202ENST00000412507 KBTBD4Q9NVX7 518 aa20.57■□□□□ 0.88
TRIM56-202ENST00000412507 FAM13BQ9NYF5 915 aa20.57■□□□□ 0.88
TRIM56-202ENST00000412507 CNTN3Q9P232 1028 aa20.57■□□□□ 0.88
TRIM56-202ENST00000412507 SSX2IPQ9Y2D8 614 aa20.57■□□□□ 0.88
TRIM56-202ENST00000412507 USP15Q9Y4E8 981 aaPredicted RBP20.57■□□□□ 0.88
TRIM56-202ENST00000412507 MYO10Q9HD67 2058 aa20.57■□□□□ 0.88
TRIM56-202ENST00000412507 DENND4AQ7Z401 1863 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 FRMD3A2A2Y4 597 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 TISP43B9A030 160 aa20.56■□□□□ 0.88
TRIM56-202ENST00000412507 POLR2DO15514 142 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms