RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 PTH1RQ03431 593 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 ITGA9Q13797 1035 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 KPNB1Q14974 876 aaKnown RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 NPTX1Q15818 432 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 PPP1R2P3Q6NXS1 205 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 FAM122CQ6P4D5 195 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 MRPL10Q7Z7H8 261 aaKnown RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 GATAD2AQ86YP4 633 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 HID1Q8IV36 788 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 MMAAQ8IVH4 418 aaKnown RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 HS6ST3Q8IZP7 471 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 SHCBP1Q8NEM2 672 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 OR10Z1Q8NGY1 313 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 IFT74Q96LB3 600 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 DDX50Q9BQ39 737 aaKnown RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 SLC12A5Q9H2X9 1139 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 SLITRK6Q9H5Y7 841 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 C14orf93Q9H972 538 aaKnown RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 DDX43Q9NXZ2 648 aaKnown RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 C9orf78Q9NZ63 289 aaPredicted RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 EHD2Q9NZN4 543 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 ASIC3Q9UHC3 531 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 PCOLCE2Q9UKZ9 415 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 SOBPA7XYQ1 873 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 XPO1O14980 1071 aaKnown RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 ALOX15BO15296 676 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 NCAM2O15394 837 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 ZBTB11O95625 1053 aaPredicted RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 EGFRP00533 1210 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 OAS1P00973 400 aaKnown RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 FUCA1P04066 466 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 RASA1P20936 1047 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 PRKAR1BP31321 381 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 HSPA9P38646 679 aaKnown RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 GRIA2P42262 883 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 PTPN9P43378 593 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 IFITM2Q01629 132 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 TAF12Q16514 161 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 NFE2Q16621 373 aaPredicted RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 KRT24Q2M2I5 525 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 SPDYAQ5MJ70 313 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 SND1Q7KZF4 910 aaKnown RBP eCLIP5.55□□□□□ -1.52
HERC4-205ENST00000412272 CROCCP3Q8IVE0 287 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 NUTM2AQ8IVF1 878 aaPredicted RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 BBOF1Q8ND07 529 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 SPATA20Q8TB22 786 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 CALML6Q8TD86 181 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 GIPC3Q8TF64 312 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 UTP4Q969X6 686 aaKnown RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 SLC47A1Q96FL8 570 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 IFT22Q9H7X7 185 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 MMRN2Q9H8L6 949 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 USP29Q9HBJ7 922 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 RIC8AQ9NPQ8 531 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 FNIP2Q9P278 1114 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 LARSQ9P2J5 1176 aaKnown RBP5.55□□□□□ -1.52
HERC4-205ENST00000412272 DNM3Q9UQ16 869 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 ERVK-11Q9UQG0 969 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 SPEF1Q9Y4P9 236 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 MST1RQ04912 1400 aa5.55□□□□□ -1.52
HERC4-205ENST00000412272 MYO5BQ9ULV0 1848 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 A0A087WWV3 80 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 IQANK1A0A1B0GTG1 560 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 B8ZZF3 427 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 TK2O00142 265 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 ST8SIA5O15466 376 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 APBB3O95704 486 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 MTHFD1P11586 935 aaKnown RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 IST1P53990 364 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 CENPCQ03188 943 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 TRAP1Q12931 704 aaKnown RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 SEMA3AQ14563 771 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 TCEAL1Q15170 157 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 FAM133BQ5BKY9 247 aaKnown RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 RNASEH2BQ5TBB1 312 aaKnown RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 B3GNT6Q6ZMB0 384 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 ZNF565Q8N9K5 539 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 SLC17A8Q8NDX2 589 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 EME1Q96AY2 570 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 HDAC11Q96DB2 347 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 TTC25Q96NG3 672 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 CNOT10Q9H9A5 744 aaKnown RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 LGR6Q9HBX8 967 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 TRPM5Q9NZQ8 1165 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 SLC8A2Q9UPR5 921 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 C1orf167Q5SNV9 1468 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 MYH8P13535 1937 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 SMIM31A0A1B0GVY4 71 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 BACH1O14867 736 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 RGS13O14921 159 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 CASQ2O14958 399 aaPredicted RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 C3P01024 1663 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 SNRPAP09012 282 aaKnown RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 NCAM1P13591 858 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 BLVRAP53004 296 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 DIXDC1Q155Q3 683 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 PDS5AQ29RF7 1337 aaKnown RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 HABP4Q5JVS0 413 aaKnown RBP5.54□□□□□ -1.52
HERC4-205ENST00000412272 FYB2Q5VWT5 728 aa5.54□□□□□ -1.52
HERC4-205ENST00000412272 BLOC1S2Q6QNY1 142 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms