RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 TOPORSQ9NS56 1045 aaPredicted RBP12.57□□□□□ -0.4
SNRNP35-202ENST00000412157 TRMT1Q9NXH9 659 aaKnown RBP12.57□□□□□ -0.4
SNRNP35-202ENST00000412157 DNAJC12Q9UKB3 198 aa12.57□□□□□ -0.4
SNRNP35-202ENST00000412157 CPSF3Q9UKF6 684 aaKnown RBP12.57□□□□□ -0.4
SNRNP35-202ENST00000412157 PPP2R2CQ9Y2T4 447 aa12.57□□□□□ -0.4
SNRNP35-202ENST00000412157 MOXD2PA6NHM9 499 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 PHACTR2O75167 634 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 CSDE1O75534 798 aaKnown RBP12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 NDUFA10O95299 355 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 IQCF3P0C7M6 154 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 CCDC172P0C7W6 258 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 FERP16591 822 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 TNFSF9P41273 254 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 STAT1P42224 750 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 PIK3CAP42336 1068 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 CRYBB1P53674 252 aaPredicted RBP12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 CLDN10P78369 228 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 APBA1Q02410 837 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 PTPN11Q06124 597 aaPredicted RBP12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 SEZ6Q53EL9 994 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 CCSAPQ6IQ19 270 aaPredicted RBP12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 GDF6Q6KF10 455 aaPredicted RBP12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 DPY19L2P1Q6NXN4 242 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 NOTUMQ6P988 496 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 TOGARAM2Q6ZUX3 1019 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 SV2AQ7L0J3 742 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 CDR2LQ86X02 465 aaPredicted RBP12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 WDR49Q8IV35 697 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 ZNF333Q96JL9 665 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 PPP1R13BQ96KQ4 1090 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 FAM81BQ96LP2 452 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 CCDC42Q96M95 316 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 NT5C1BQ96P26 610 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 POP1Q99575 1024 aaKnown RBP12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 TSEN34Q9BSV6 310 aaKnown RBP12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 STK33Q9BYT3 514 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 AIPL1Q9NZN9 384 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 COQ4Q9Y3A0 265 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 TRPV2Q9Y5S1 764 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 HTTP42858 3142 aa12.56□□□□□ -0.4
SNRNP35-202ENST00000412157 SSU72P8A0A1W2PR75 194 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 KBTBD13C9JR72 458 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 KIF2AO00139 706 aaPredicted RBP12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 AKR1B10O60218 316 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 FAM189A1O60320 539 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 ZC3H11AO75152 810 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 CLSTN1O94985 981 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 TNNC2P02585 160 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 CLTAP09496 248 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 TMEM191BP0C7N4 346 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 FGFR4P22455 802 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 EIF4BP23588 611 aaKnown RBP12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 ACLYP53396 1101 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 OSTNP61366 133 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 KRT83P78385 493 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 MRPS6P82932 125 aaKnown RBP12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 POU5F1Q01860 360 aaKnown RBP12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 KLHL30Q0D2K2 578 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 ITGA7Q13683 1181 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 SNX17Q15036 470 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 ZACNQ401N2 412 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 WDR44Q5JSH3 913 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 LMBRD2Q68DH5 695 aaPredicted RBP12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 GJB7Q6PEY0 223 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 ARRDC4Q8NCT1 418 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 LMO3Q8TAP4 145 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 ANKRD36BP1Q96IX9 119 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 GLT1D1Q96MS3 346 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 DESI2Q9BSY9 194 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 CCDC94Q9BW85 323 aaPredicted RBP12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 NHEJ1Q9H9Q4 299 aaPredicted RBP12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 C1orf112Q9NSG2 853 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 RAB20Q9NX57 234 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 COLQQ9Y215 455 aaPredicted RBP12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 NOD1Q9Y239 953 aa12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 BZW2Q9Y6E2 419 aaKnown RBP12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 EPN1Q9Y6I3 576 aaPredicted RBP12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 MKI67P46013 3256 aaKnown RBP12.55□□□□□ -0.4
SNRNP35-202ENST00000412157 A0A1B0GUA9 196 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 USP27XA6NNY8 438 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 EIF3CLB5ME19 914 aaKnown RBP12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 F8VZ95 297 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 OFD1O75665 1012 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 NPTXRO95502 500 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 HLA-DRAP01903 254 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 C4BPAP04003 597 aaKnown RBP12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 STAG3L1P0CL83 205 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 SOX5P35711 763 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 EIF4A3P38919 411 aaKnown RBP12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 MFAP3P55082 362 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 WNT7BP56706 349 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 JAM2P57087 298 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 ARID5AQ03989 594 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 MAPK8IP2Q13387 824 aaPredicted RBP12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 DRAP1Q14919 205 aaPredicted RBP12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 SPA17Q15506 151 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 PTPN14Q15678 1187 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 ARHGAP44Q17R89 818 aa12.54□□□□□ -0.4
SNRNP35-202ENST00000412157 SLC27A1Q6PCB7 646 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms