RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 IFT20Q8IY31 132 aa26.39■■□□□ 1.81
VRK2-202ENST00000412104 TCP11Q8WWU5 503 aa26.39■■□□□ 1.81
VRK2-202ENST00000412104 CGRRF1Q99675 332 aa26.39■■□□□ 1.81
VRK2-202ENST00000412104 CCDC113Q9H0I3 377 aa26.39■■□□□ 1.81
VRK2-202ENST00000412104 LOC102724159A0A0B4J2E5 919 aa26.38■■□□□ 1.81
VRK2-202ENST00000412104 RAD51CO43502 376 aa26.38■■□□□ 1.81
VRK2-202ENST00000412104 GAS2O43903 313 aaKnown RBP26.38■■□□□ 1.81
VRK2-202ENST00000412104 VNN1O95497 513 aa26.38■■□□□ 1.81
VRK2-202ENST00000412104 EFNA5P52803 228 aa26.38■■□□□ 1.81
VRK2-202ENST00000412104 PWP2Q15269 919 aaKnown RBP26.38■■□□□ 1.81
VRK2-202ENST00000412104 WDR44Q5JSH3 913 aa26.38■■□□□ 1.81
VRK2-202ENST00000412104 CDCA2Q69YH5 1023 aaPredicted RBP26.38■■□□□ 1.81
VRK2-202ENST00000412104 ZPBP2Q6X784 338 aa26.38■■□□□ 1.81
VRK2-202ENST00000412104 SLC10A4Q96EP9 437 aa26.38■■□□□ 1.81
VRK2-202ENST00000412104 PNMA3Q9UL41 463 aa26.38■■□□□ 1.81
VRK2-202ENST00000412104 IGKV6-21A0A0C4DH24 114 aa26.37■■□□□ 1.81
VRK2-202ENST00000412104 TTLL13PA6NNM8 815 aa26.37■■□□□ 1.81
VRK2-202ENST00000412104 ATMINO43313 823 aaPredicted RBP26.37■■□□□ 1.81
VRK2-202ENST00000412104 TXNP10599 105 aaKnown RBP26.37■■□□□ 1.81
VRK2-202ENST00000412104 HARSP12081 509 aaKnown RBP26.37■■□□□ 1.81
VRK2-202ENST00000412104 GUCY2DQ02846 1103 aa26.37■■□□□ 1.81
VRK2-202ENST00000412104 LAMTOR4Q0VGL1 99 aa26.37■■□□□ 1.81
VRK2-202ENST00000412104 TMEM63BQ5T3F8 832 aa26.37■■□□□ 1.81
VRK2-202ENST00000412104 DCAF12L1Q5VU92 463 aa26.37■■□□□ 1.81
VRK2-202ENST00000412104 SND1Q7KZF4 910 aaKnown RBP eCLIP26.37■■□□□ 1.81
VRK2-202ENST00000412104 LRRC71Q8N4P6 559 aa26.37■■□□□ 1.81
VRK2-202ENST00000412104 CCDC102AQ96A19 550 aa26.37■■□□□ 1.81
VRK2-202ENST00000412104 AP1M1Q9BXS5 423 aa26.37■■□□□ 1.81
VRK2-202ENST00000412104 PLEKHA4Q9H4M7 779 aa26.37■■□□□ 1.81
VRK2-202ENST00000412104 CNTNAP2Q9UHC6 1331 aa26.37■■□□□ 1.81
VRK2-202ENST00000412104 ZC3H4Q9UPT8 1303 aaKnown RBP26.37■■□□□ 1.81
VRK2-202ENST00000412104 ZSCAN5CA6NGD5 496 aaPredicted RBP26.37■■□□□ 1.81
VRK2-202ENST00000412104 MSCO60682 206 aa26.37■■□□□ 1.81
VRK2-202ENST00000412104 AARSP49588 968 aaKnown RBP eCLIP26.37■■□□□ 1.818e-6■■■■■ 52.4
VRK2-202ENST00000412104 PDGFCQ9NRA1 345 aa26.37■■□□□ 1.81
VRK2-202ENST00000412104 TTC7AQ9ULT0 858 aaPredicted RBP26.37■■□□□ 1.81
VRK2-202ENST00000412104 DIS3Q9Y2L1 958 aaKnown RBP26.37■■□□□ 1.81
VRK2-202ENST00000412104 ASB14A6NK59 587 aa26.36■■□□□ 1.81
VRK2-202ENST00000412104 MTA2O94776 668 aa26.36■■□□□ 1.81
VRK2-202ENST00000412104 MXD4Q14582 209 aaPredicted RBP26.36■■□□□ 1.81
VRK2-202ENST00000412104 TTLL4Q14679 1199 aa26.36■■□□□ 1.81
VRK2-202ENST00000412104 SEZ6Q53EL9 994 aa26.36■■□□□ 1.81
VRK2-202ENST00000412104 EMBQ6PCB8 327 aa26.36■■□□□ 1.81
VRK2-202ENST00000412104 EXOC8Q8IYI6 725 aa26.36■■□□□ 1.81
VRK2-202ENST00000412104 MRPL4Q9BYD3 311 aaKnown RBP26.36■■□□□ 1.81
VRK2-202ENST00000412104 EPB41L5Q9HCM4 733 aa26.36■■□□□ 1.81
VRK2-202ENST00000412104 ALG6Q9Y672 507 aa26.36■■□□□ 1.81
VRK2-202ENST00000412104 PLXNA1Q9UIW2 1896 aa26.36■■□□□ 1.81
VRK2-202ENST00000412104 IQCA1LA6NCM1 817 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 CCDC188H7C350 402 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 KRIT1O00522 736 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 CLDN3O15551 220 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 GRIN3BO60391 1043 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 SRGAP2CP0DJJ0 459 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 SPOPLQ6IQ16 392 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 RNF149Q8NC42 400 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 GTF3C2Q8WUA4 911 aaPredicted RBP26.35■■□□□ 1.81
VRK2-202ENST00000412104 CARD9Q9H257 536 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 CHORDC1Q9UHD1 332 aaPredicted RBP26.35■■□□□ 1.81
VRK2-202ENST00000412104 PLXNB2O15031 1838 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 ESYT3A0FGR9 886 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 CALCAP01258 141 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 CYP1A2P05177 515 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 SLC26A2P50443 739 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 HSP90B2PQ58FF3 399 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 ARMCX2Q7L311 632 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 ZBTB8OSQ8IWT0 167 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 ZNF653Q96CK0 615 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 SMARCAD1Q9H4L7 1026 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 MED4Q9NPJ6 270 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 GTF3C4Q9UKN8 822 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 TRPC6Q9Y210 931 aa26.35■■□□□ 1.81
VRK2-202ENST00000412104 FAM189A1O60320 539 aa26.34■■□□□ 1.81
VRK2-202ENST00000412104 TOM1L1O75674 476 aa26.34■■□□□ 1.81
VRK2-202ENST00000412104 FAM193AP78312 1265 aa26.34■■□□□ 1.81
VRK2-202ENST00000412104 CLEC16AQ2KHT3 1053 aa26.34■■□□□ 1.81
VRK2-202ENST00000412104 BRSK2Q8IWQ3 736 aa26.34■■□□□ 1.81
VRK2-202ENST00000412104 OR5B17Q8NGF7 314 aa26.34■■□□□ 1.81
VRK2-202ENST00000412104 FAM71BQ8TC56 605 aa26.34■■□□□ 1.81
VRK2-202ENST00000412104 TRAPPC12Q8WVT3 735 aa26.34■■□□□ 1.81
VRK2-202ENST00000412104 CAVIN3Q969G5 261 aa26.34■■□□□ 1.81
VRK2-202ENST00000412104 ZNF408Q9H9D4 720 aa26.34■■□□□ 1.81
VRK2-202ENST00000412104 APOBEC3GQ9HC16 384 aaKnown RBP26.34■■□□□ 1.81
VRK2-202ENST00000412104 PRKCBP05771 671 aa26.33■■□□□ 1.81
VRK2-202ENST00000412104 ITGA4P13612 1032 aa26.33■■□□□ 1.81
VRK2-202ENST00000412104 CARSP49589 748 aaKnown RBP26.33■■□□□ 1.81
VRK2-202ENST00000412104 ACAD10Q6JQN1 1059 aa26.33■■□□□ 1.81
VRK2-202ENST00000412104 ZBTB33Q86T24 672 aa26.33■■□□□ 1.81
VRK2-202ENST00000412104 GPRC5AQ8NFJ5 357 aa26.33■■□□□ 1.81
VRK2-202ENST00000412104 CASKIN2Q8WXE0 1202 aa26.33■■□□□ 1.81
VRK2-202ENST00000412104 ACO2Q99798 780 aaKnown RBP26.33■■□□□ 1.81
VRK2-202ENST00000412104 NUP85Q9BW27 656 aa26.33■■□□□ 1.81
VRK2-202ENST00000412104 TMEM110-MUSTN1A8MSY1 372 aa26.33■■□□□ 1.81
VRK2-202ENST00000412104 FGGP02679 453 aa26.33■■□□□ 1.81
VRK2-202ENST00000412104 TNFSF9P41273 254 aa26.33■■□□□ 1.81
VRK2-202ENST00000412104 PAK2Q13177 524 aa26.33■■□□□ 1.81
VRK2-202ENST00000412104 MAPK6Q16659 721 aa26.33■■□□□ 1.81
VRK2-202ENST00000412104 PNMA8AQ86V59 439 aaPredicted RBP26.33■■□□□ 1.81
VRK2-202ENST00000412104 ZNF564Q8TBZ8 553 aaPredicted RBP26.33■■□□□ 1.81
VRK2-202ENST00000412104 ALG3Q92685 438 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms