RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ADAM12O43184 909 aa15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 XYLBO75191 536 aa15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 RECQL4O94761 1208 aa15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 LIG1P18858 919 aa15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 FOSBP53539 338 aa15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 ELAVL2Q12926 359 aaKnown RBP15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 PRPF4BQ13523 1007 aaKnown RBP15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 SNW1Q13573 536 aaKnown RBP15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 ANKRD1Q15327 319 aa15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 NAB2Q15742 525 aa15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 CDCA2Q69YH5 1023 aaPredicted RBP15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 PDXDC1Q6P996 788 aa15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 CATSPER3Q86XQ3 398 aa15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 NOSTRINQ8IVI9 506 aa15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 DIS3L2Q8IYB7 885 aaKnown RBP15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 RMDN1Q96DB5 314 aa15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 HINFPQ9BQA5 517 aa15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 USP20Q9Y2K6 914 aa15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 DCHS1Q96JQ0 3298 aa15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 VWA8A3KMH1 1905 aa15.74■□□□□ 0.11
HLA-DQB2-229ENST00000411527 EP300Q09472 2414 aaPredicted RBP15.73■□□□□ 0.11
HLA-DQB2-229ENST00000411527 KANSL1LA0AUZ9 987 aa15.73■□□□□ 0.11
HLA-DQB2-229ENST00000411527 OR1D2P34982 312 aa15.73■□□□□ 0.11
HLA-DQB2-229ENST00000411527 MAPK6Q16659 721 aa15.73■□□□□ 0.11
HLA-DQB2-229ENST00000411527 AXDND1Q5T1B0 1012 aaPredicted RBP15.73■□□□□ 0.11
HLA-DQB2-229ENST00000411527 MTSS1LQ765P7 747 aa15.73■□□□□ 0.11
HLA-DQB2-229ENST00000411527 ITFG1Q8TB96 612 aa15.73■□□□□ 0.11
HLA-DQB2-229ENST00000411527 SLC7A14Q8TBB6 771 aa15.73■□□□□ 0.11
HLA-DQB2-229ENST00000411527 BSNDQ8WZ55 320 aa15.73■□□□□ 0.11
HLA-DQB2-229ENST00000411527 NACC1Q96RE7 527 aa15.73■□□□□ 0.11
HLA-DQB2-229ENST00000411527 ADPGKQ9BRR6 497 aa15.73■□□□□ 0.11
HLA-DQB2-229ENST00000411527 C2orf40Q9H1Z8 148 aa15.73■□□□□ 0.11
HLA-DQB2-229ENST00000411527 TMEM60Q9H2L4 133 aa15.73■□□□□ 0.11
HLA-DQB2-229ENST00000411527 TUFT1Q9NNX1 390 aa15.73■□□□□ 0.11
HLA-DQB2-229ENST00000411527 GDAQ9Y2T3 454 aa15.73■□□□□ 0.11
HLA-DQB2-229ENST00000411527 COL4A3Q01955 1670 aa15.73■□□□□ 0.11
HLA-DQB2-229ENST00000411527 ACKR2O00590 384 aa15.72■□□□□ 0.11
HLA-DQB2-229ENST00000411527 MED24O75448 989 aa15.72■□□□□ 0.11
HLA-DQB2-229ENST00000411527 PRKCBP05771 671 aa15.72■□□□□ 0.11
HLA-DQB2-229ENST00000411527 HOXA9P31269 272 aa15.72■□□□□ 0.11
HLA-DQB2-229ENST00000411527 RAB33AQ14088 237 aa15.72■□□□□ 0.11
HLA-DQB2-229ENST00000411527 TRIM29Q14134 588 aa15.72■□□□□ 0.11
HLA-DQB2-229ENST00000411527 ME3Q16798 604 aa15.72■□□□□ 0.11
HLA-DQB2-229ENST00000411527 UVSSAQ2YD98 709 aa15.72■□□□□ 0.11
HLA-DQB2-229ENST00000411527 SLC44A4Q53GD3 710 aa15.72■□□□□ 0.11
HLA-DQB2-229ENST00000411527 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.72■□□□□ 0.11
HLA-DQB2-229ENST00000411527 MAML2Q8IZL2 1156 aaPredicted RBP15.72■□□□□ 0.11
HLA-DQB2-229ENST00000411527 RUBCNQ92622 972 aa15.72■□□□□ 0.11
HLA-DQB2-229ENST00000411527 KXD1Q9BQD3 176 aa15.72■□□□□ 0.11
HLA-DQB2-229ENST00000411527 BCO2Q9BYV7 579 aa15.72■□□□□ 0.11
HLA-DQB2-229ENST00000411527 HCFC1R1Q9NWW0 138 aa15.72■□□□□ 0.11
HLA-DQB2-229ENST00000411527 TRIP11Q15643 1979 aa15.72■□□□□ 0.11
HLA-DQB2-229ENST00000411527 NOTCH4Q99466 2003 aa15.72■□□□□ 0.11
HLA-DQB2-229ENST00000411527 LARGE1O95461 756 aa15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 EDN1P05305 212 aa15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 FGFR3P22607 806 aa15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 IGFBP6P24592 240 aaPredicted RBP15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 MCM7P33993 719 aa15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 PRKCQQ04759 706 aa15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 UBXN2BQ14CS0 331 aa15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 MLF2Q15773 248 aaPredicted RBP15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 EEF1DP3Q658K8 133 aa15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 PADI6Q6TGC4 694 aa15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 DCLK2Q8N568 766 aa15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 DEPTORQ8TB45 409 aa15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 GTF3C6Q969F1 213 aa15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 POLR3CQ9BUI4 534 aaPredicted RBP15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 DDX23Q9BUQ8 820 aaKnown RBP15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 CCDC113Q9H0I3 377 aa15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 SPATA6Q9NWH7 488 aaPredicted RBP15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 DNMT3BQ9UBC3 853 aaKnown RBP15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 MTF2Q9Y483 593 aaPredicted RBP15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 ZNF292O60281 2723 aa15.71■□□□□ 0.11
HLA-DQB2-229ENST00000411527 ARHGEF35A5YM69 484 aa15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 FAM170BA6NMN3 283 aa15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 LAMTOR5O43504 91 aa15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 KINO60870 393 aaKnown RBP15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 B3GAT3O94766 335 aa15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 CYP11B2P19099 503 aa15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 CD72P21854 359 aa15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 NAMPTP43490 491 aa15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 PFKPQ01813 784 aa15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 PABPC1LQ4VXU2 614 aaKnown RBP15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 GLRA4Q5JXX5 417 aa15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 DGLUCYQ7Z3D6 616 aa15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 NPAS3Q8IXF0 933 aa15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 SUMF1Q8NBK3 374 aa15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 NSUN7Q8NE18 718 aaKnown RBP15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 ING5Q8WYH8 240 aa15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 POLD4Q9HCU8 107 aa15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 MTRRQ9UBK8 725 aa15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 CDY1Q9Y6F8 540 aa15.7■□□□□ 0.1
HLA-DQB2-229ENST00000411527 PATJQ8NI35 1801 aa15.69■□□□□ 0.1
HLA-DQB2-229ENST00000411527 JAK2O60674 1132 aa15.69■□□□□ 0.1
HLA-DQB2-229ENST00000411527 POU2F2P09086 479 aa15.69■□□□□ 0.1
HLA-DQB2-229ENST00000411527 RBM25P49756 843 aaKnown RBP15.69■□□□□ 0.1
HLA-DQB2-229ENST00000411527 CLCNKBP51801 687 aa15.69■□□□□ 0.1
HLA-DQB2-229ENST00000411527 ANAPC15P60006 121 aa15.69■□□□□ 0.1
HLA-DQB2-229ENST00000411527 PPP2R5AQ15172 486 aa15.69■□□□□ 0.1
HLA-DQB2-229ENST00000411527 ZNF528Q3MIS6 628 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms