RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 NUP133Q8WUM0 1156 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 ZNF566Q969W8 418 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 MSLNLQ96KJ4 702 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 TTC14Q96N46 770 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 TUBGCP5Q96RT8 1024 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 VPS45Q9NRW7 570 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 RIC8BQ9NVN3 520 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 DACT1Q9NYF0 836 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 FBLN5Q9UBX5 448 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 STAP2Q9UGK3 403 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 SLC13A4Q9UKG4 626 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 CDY2AQ9Y6F7 541 aa5.73□□□□□ -1.49
LSM5-205ENST00000409952 F8W8V4 182 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 SYT5O00445 386 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 ACKR2O00590 384 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 TMCC2O75069 709 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 DDX58O95786 925 aaKnown RBP5.72□□□□□ -1.49
LSM5-205ENST00000409952 BRAFP15056 766 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 RPS6KB1P23443 525 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 EEF1GP26641 437 aaKnown RBP5.72□□□□□ -1.49
LSM5-205ENST00000409952 POLD1P28340 1107 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 SLC7A1P30825 629 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 MCAMP43121 646 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 ITGA8P53708 1063 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 NKX6-1P78426 367 aaPredicted RBP5.72□□□□□ -1.49
LSM5-205ENST00000409952 ADCY2Q08462 1091 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 TMEM62Q0P6H9 643 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 NOGQ13253 232 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 GRM1Q13255 1194 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 MYBPC3Q14896 1274 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 KCNA10Q16322 511 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 PLEKHN1Q494U1 663 aaPredicted RBP5.72□□□□□ -1.49
LSM5-205ENST00000409952 C1QTNF12Q5T7M4 302 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 KLHDC7AQ5VTJ3 777 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 OLFML2BQ68BL8 750 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 PAQR3Q6TCH7 311 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 SPOCD1Q6ZMY3 1216 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 FASTKD5Q7L8L6 764 aaKnown RBP5.72□□□□□ -1.49
LSM5-205ENST00000409952 TMC6Q7Z403 805 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.72□□□□□ -1.49
LSM5-205ENST00000409952 ANKRD23Q86SG2 305 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 ESX1Q8N693 406 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 PLEKHO2Q8TD55 490 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 ASB15Q8WXK1 588 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 ERCC4Q92889 916 aaPredicted RBP5.72□□□□□ -1.49
LSM5-205ENST00000409952 FOXRED1Q96CU9 486 aaPredicted RBP5.72□□□□□ -1.49
LSM5-205ENST00000409952 FAM167AQ96KS9 214 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 TOX2Q96NM4 488 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 GBP4Q96PP9 640 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 ADI1Q9BV57 179 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 SORBS1Q9BX66 1292 aaKnown RBP5.72□□□□□ -1.49
LSM5-205ENST00000409952 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.72□□□□□ -1.49
LSM5-205ENST00000409952 PRSS50Q9UI38 385 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 TMX2Q9Y320 296 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 USP19O94966 1318 aa5.72□□□□□ -1.49
LSM5-205ENST00000409952 ANKRD18BA2A2Z9 1011 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 TCAF2A6NFQ2 919 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 N4BP3O15049 544 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 GFPT2O94808 682 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 FUCA1P04066 466 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 RPN1P04843 607 aaKnown RBP5.71□□□□□ -1.5
LSM5-205ENST00000409952 MMEP08473 750 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 CDR1P51861 262 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 LINC00310P59036 64 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 HERVK_113P62684 666 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 PPARAQ07869 468 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 RAB3GAP1Q15042 981 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 EMC4Q5J8M3 183 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 PRAMEF9Q5VWM5 478 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 CIAPIN1Q6FI81 312 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 BTNL9Q6UXG8 535 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 DSTYKQ6XUX3 929 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 KANSL1Q7Z3B3 1105 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 LRRTM4Q86VH4 590 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 SESTD1Q86VW0 696 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 LDHDQ86WU2 507 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 SIAH1Q8IUQ4 282 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 TXLNBQ8N3L3 684 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 ASB12Q8WXK4 309 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 DPF2Q92785 391 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 MUL1Q969V5 352 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 SLC35A4Q96G79 324 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 SGPP1Q9BX95 441 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 GREM2Q9H772 168 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 PLEKHA5Q9HAU0 1116 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 OBP2BQ9NPH6 170 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 SMYD2Q9NRG4 433 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 LMBRD1Q9NUN5 540 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 GGA3Q9NZ52 723 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 ARHGAP28Q9P2N2 729 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.71□□□□□ -1.5
LSM5-205ENST00000409952 SLC39A10Q9ULF5 831 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 TELO2Q9Y4R8 837 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 ASB1Q9Y576 335 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 PCDHB1Q9Y5F3 818 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 PCDHA5Q9Y5H7 936 aa5.71□□□□□ -1.5
LSM5-205ENST00000409952 A6NLC8 198 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 LGALS16A8MUM7 142 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 NPIPB6E9PJ23 425 aa5.7□□□□□ -1.5
LSM5-205ENST00000409952 H3BUI4 141 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms