RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 DHX37Q8IY37 1157 aaKnown RBP21.63■■□□□ 1.05
USP39-204ENST00000409766 SHCBP1Q8NEM2 672 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 ATP8B4Q8TF62 1192 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 ZBTB9Q96C00 473 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 SPATA33Q96N06 139 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 EPB41L5Q9HCM4 733 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 MED4Q9NPJ6 270 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 DIS3Q9Y2L1 958 aaKnown RBP21.63■■□□□ 1.05
USP39-204ENST00000409766 ALG6Q9Y672 507 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 LOC102724159A0A0B4J2E5 919 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 IGKV6-21A0A0C4DH24 114 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 ZSCAN5CA6NGD5 496 aaPredicted RBP21.63■■□□□ 1.05
USP39-204ENST00000409766 GAS2O43903 313 aaKnown RBP21.63■■□□□ 1.05
USP39-204ENST00000409766 VNN1O95497 513 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 GUCY2DQ02846 1103 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 PWP2Q15269 919 aaKnown RBP21.63■■□□□ 1.05
USP39-204ENST00000409766 EAPPQ56P03 285 aaPredicted RBP21.63■■□□□ 1.05
USP39-204ENST00000409766 CDCA2Q69YH5 1023 aaPredicted RBP21.63■■□□□ 1.05
USP39-204ENST00000409766 CCDC102AQ96A19 550 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 AP1M1Q9BXS5 423 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 CCDC113Q9H0I3 377 aa21.63■■□□□ 1.05
USP39-204ENST00000409766 TAF1DQ9H5J8 278 aaPredicted RBP21.63■■□□□ 1.05
USP39-204ENST00000409766 CNTNAP2Q9UHC6 1331 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 TTLL13PA6NNM8 815 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 CCDC188H7C350 402 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 MSCO60682 206 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 KRT5P13647 590 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 PLCB4Q15147 1175 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 WDR44Q5JSH3 913 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 SND1Q7KZF4 910 aaKnown RBP eCLIP21.62■■□□□ 1.054e-6■■□□□ 12.7
USP39-204ENST00000409766 TCP11Q8WWU5 503 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 CAVIN3Q969G5 261 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 CARD9Q9H257 536 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 SCN4AP35499 1836 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 KRIT1O00522 736 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 CYP2C8P10632 490 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 PIK3CAP42336 1068 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 CARSP49589 748 aaKnown RBP21.62■■□□□ 1.05
USP39-204ENST00000409766 LAMTOR4Q0VGL1 99 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 MXD4Q14582 209 aaPredicted RBP21.62■■□□□ 1.05
USP39-204ENST00000409766 HSP90B2PQ58FF3 399 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 EXOC8Q8IYI6 725 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 COPS5Q92905 334 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 CGRRF1Q99675 332 aa21.62■■□□□ 1.05
USP39-204ENST00000409766 CLDN3O15551 220 aa21.61■■□□□ 1.05
USP39-204ENST00000409766 CYP1A2P05177 515 aa21.61■■□□□ 1.05
USP39-204ENST00000409766 TXNP10599 105 aaKnown RBP21.61■■□□□ 1.05
USP39-204ENST00000409766 BIRC3Q13489 604 aa21.61■■□□□ 1.05
USP39-204ENST00000409766 TMEM63BQ5T3F8 832 aa21.61■■□□□ 1.05
USP39-204ENST00000409766 FAM71BQ8TC56 605 aa21.61■■□□□ 1.05
USP39-204ENST00000409766 SLC10A4Q96EP9 437 aa21.61■■□□□ 1.05
USP39-204ENST00000409766 PLEKHA4Q9H4M7 779 aa21.61■■□□□ 1.05
USP39-204ENST00000409766 EFCC1Q9HA90 598 aa21.61■■□□□ 1.05
USP39-204ENST00000409766 CHORDC1Q9UHD1 332 aaPredicted RBP21.61■■□□□ 1.05
USP39-204ENST00000409766 GTF3C4Q9UKN8 822 aa21.61■■□□□ 1.05
USP39-204ENST00000409766 ESYT3A0FGR9 886 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 SART1O43290 800 aaKnown RBP21.6■■□□□ 1.05
USP39-204ENST00000409766 FAM189A1O60320 539 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 SYF2O95926 243 aaKnown RBP21.6■■□□□ 1.05
USP39-204ENST00000409766 ACAD10Q6JQN1 1059 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 LRRC71Q8N4P6 559 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 MRPL4Q9BYD3 311 aaKnown RBP21.6■■□□□ 1.05
USP39-204ENST00000409766 PDGFCQ9NRA1 345 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 ATMINO43313 823 aaPredicted RBP21.6■■□□□ 1.05
USP39-204ENST00000409766 TOM1L1O75674 476 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 SRGAP2CP0DJJ0 459 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 ITGA4P13612 1032 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 SLC26A2P50443 739 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 CLEC16AQ2KHT3 1053 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 SEZ6Q53EL9 994 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 SPOPLQ6IQ16 392 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 UBE2Q2Q8WVN8 375 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 CASKIN2Q8WXE0 1202 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 ALG3Q92685 438 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 RPS6KC1Q96S38 1066 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 SMARCAD1Q9H4L7 1026 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 PNMA3Q9UL41 463 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 NFU1Q9UMS0 254 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 PCDHB2Q9Y5E7 798 aa21.6■■□□□ 1.05
USP39-204ENST00000409766 ASB14A6NK59 587 aa21.59■■□□□ 1.05
USP39-204ENST00000409766 MIF4GDA9UHW6 222 aaKnown RBP21.59■■□□□ 1.05
USP39-204ENST00000409766 FGGP02679 453 aa21.59■■□□□ 1.05
USP39-204ENST00000409766 GYS2P54840 703 aa21.59■■□□□ 1.05
USP39-204ENST00000409766 PAK2Q13177 524 aa21.59■■□□□ 1.05
USP39-204ENST00000409766 NNTQ13423 1086 aa21.59■■□□□ 1.05
USP39-204ENST00000409766 TTLL4Q14679 1199 aa21.59■■□□□ 1.05
USP39-204ENST00000409766 RNF149Q8NC42 400 aa21.59■■□□□ 1.05
USP39-204ENST00000409766 OR5B17Q8NGF7 314 aa21.59■■□□□ 1.05
USP39-204ENST00000409766 RNPC3Q96LT9 517 aaKnown RBP21.59■■□□□ 1.05
USP39-204ENST00000409766 ACO2Q99798 780 aaKnown RBP21.59■■□□□ 1.05
USP39-204ENST00000409766 DDX47Q9H0S4 455 aaKnown RBP21.59■■□□□ 1.05
USP39-204ENST00000409766 APOBEC3GQ9HC16 384 aaKnown RBP21.59■■□□□ 1.05
USP39-204ENST00000409766 AGPSO00116 658 aa21.58■■□□□ 1.05
USP39-204ENST00000409766 CALCAP01258 141 aa21.58■■□□□ 1.05
USP39-204ENST00000409766 ACO1P21399 889 aaKnown RBP21.58■■□□□ 1.05
USP39-204ENST00000409766 ZNF677Q86XU0 584 aa21.58■■□□□ 1.05
USP39-204ENST00000409766 BRSK2Q8IWQ3 736 aa21.58■■□□□ 1.05
USP39-204ENST00000409766 GTF3C2Q8WUA4 911 aaPredicted RBP21.58■■□□□ 1.05
USP39-204ENST00000409766 IFT81Q8WYA0 676 aa21.58■■□□□ 1.05
USP39-204ENST00000409766 ZNF653Q96CK0 615 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms