RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 RSPH9Q9H1X1 276 aaPredicted RBP8.88□□□□□ -0.99
SCN9A-203ENST00000409672 SLC39A10Q9ULF5 831 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 H0YC42 278 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 CYB5R4Q7L1T6 521 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 TRIM42Q8IWZ5 723 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 GLT1D1Q96MS3 346 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 ADCY3O60266 1144 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 HIST1H2AGP0C0S8 130 aaPredicted RBP8.88□□□□□ -0.99
SCN9A-203ENST00000409672 HIST1H2ADP20671 130 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 KLRC2P26717 231 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 DUOXA2Q1HG44 320 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 ANKS6Q68DC2 871 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 SCG3Q8WXD2 468 aaKnown RBP8.88□□□□□ -0.99
SCN9A-203ENST00000409672 HIST1H2AHQ96KK5 128 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 HIST1H2AJQ99878 128 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 H2AFJQ9BTM1 129 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 C2orf40Q9H1Z8 148 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 MYOM2P54296 1465 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 HEG1Q9ULI3 1381 aa8.88□□□□□ -0.99
SCN9A-203ENST00000409672 APOL1O14791 398 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 NCAM1P13591 858 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 RAG1P15918 1043 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 SLC9A1P19634 815 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 TMEM132DQ14C87 1099 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 LDHDQ86WU2 507 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 DHTKD1Q96HY7 919 aaPredicted RBP8.87□□□□□ -0.99
SCN9A-203ENST00000409672 APRTP07741 180 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 WEE2P0C1S8 567 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 DDX39BQ13838 428 aaKnown RBP8.87□□□□□ -0.99
SCN9A-203ENST00000409672 CYP4A22Q5TCH4 519 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 COMMD2Q86X83 199 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 NMRK2Q9NPI5 230 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 CPDO75976 1380 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 KRT14P02533 472 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 NR3C1P04150 777 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 RWDD2BP57060 319 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 ATPAF2Q8N5M1 289 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 IPMKQ8NFU5 416 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 RUNDC3BQ96NL0 473 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 SNX24Q9Y343 169 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 RASA4BC9J798 803 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 RASA4O43374 803 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 WBP4O75554 376 aaKnown RBP8.87□□□□□ -0.99
SCN9A-203ENST00000409672 POLE2P56282 527 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 STAG2Q8N3U4 1231 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 TMEM35BQ8NCS4 154 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 MCPH1Q8NEM0 835 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 OTUB1Q96FW1 271 aaPredicted RBP8.87□□□□□ -0.99
SCN9A-203ENST00000409672 BCL2L14Q9BZR8 327 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 NFU1Q9UMS0 254 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 FTLP02792 175 aaPredicted RBP8.87□□□□□ -0.99
SCN9A-203ENST00000409672 CYP2E1P05181 493 aaPredicted RBP8.87□□□□□ -0.99
SCN9A-203ENST00000409672 MBL2P11226 248 aaPredicted RBP8.87□□□□□ -0.99
SCN9A-203ENST00000409672 DPEP1P16444 411 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 TRPC1P48995 793 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 ACSF2Q96CM8 615 aaPredicted RBP8.87□□□□□ -0.99
SCN9A-203ENST00000409672 SERPINI1Q99574 410 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 MYO3BQ8WXR4 1341 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 DCDC2CA8MYV0 355 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 CYTH3O43739 400 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 ASS1P00966 412 aaKnown RBP8.87□□□□□ -0.99
SCN9A-203ENST00000409672 TCN1P20061 433 aaPredicted RBP8.87□□□□□ -0.99
SCN9A-203ENST00000409672 HSD17B4P51659 736 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 EPM2AIP1Q7L775 607 aaPredicted RBP8.87□□□□□ -0.99
SCN9A-203ENST00000409672 KCNV2Q8TDN2 545 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 SHCBP1LQ9BZQ2 653 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 MYOZ2Q9NPC6 264 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 ATP7AQ04656 1500 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 TEX33O43247 280 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 CKBP12277 381 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 LRRC14Q15048 493 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 DGKDQ16760 1214 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 CCDC142Q17RM4 750 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 C6orf10Q5SRN2 563 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 C11orf57Q6ZUT1 292 aaPredicted RBP8.87□□□□□ -0.99
SCN9A-203ENST00000409672 NT5DC4Q86YG4 428 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 TDRKHQ9Y2W6 561 aaKnown RBP8.87□□□□□ -0.99
SCN9A-203ENST00000409672 JRKLQ9Y4A0 524 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.87□□□□□ -0.99
SCN9A-203ENST00000409672 CASTOR2A6NHX0 329 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 RGL2O15211 777 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 TDP2O95551 362 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 PCP11498 1178 aaKnown RBP8.87□□□□□ -0.99
SCN9A-203ENST00000409672 CHRM3P20309 590 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 KRT31Q15323 416 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 IRAK1BP1Q5VVH5 260 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 BRINP3Q76B58 766 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 RBM23Q86U06 439 aaKnown RBP8.87□□□□□ -0.99
SCN9A-203ENST00000409672 XXYLT1Q8NBI6 393 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 ELAC2Q9BQ52 826 aaKnown RBP8.87□□□□□ -0.99
SCN9A-203ENST00000409672 SPATA16Q9BXB7 569 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 LMBRD1Q9NUN5 540 aa8.87□□□□□ -0.99
SCN9A-203ENST00000409672 EMSYQ7Z589 1322 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 GMFGO60234 142 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 CSDE1O75534 798 aaKnown RBP8.86□□□□□ -0.99
SCN9A-203ENST00000409672 CKMP06732 381 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 ATP6V1C1P21283 382 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 ABCD1P33897 745 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 CPT1AP50416 773 aa8.86□□□□□ -0.99
SCN9A-203ENST00000409672 HPCAP84074 193 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms