RNA–Protein interactions for RNA: ENST00000409406.1

RBM4-205, Transcript of RNA binding motif protein 4, human

APPRIS P1 TSL 2 BASIC

Gene RBM4, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-205	ENST00000409406	GTPBP10	A4D1E9	387 aa	Known RBP	13.85	□□□□□ -0.19
RBM4-205	ENST00000409406	KRT86	O43790	486 aa		13.85	□□□□□ -0.19
RBM4-205	ENST00000409406	ADRB2	P07550	413 aa		13.85	□□□□□ -0.19
RBM4-205	ENST00000409406	SMPD1	P17405	629 aa		13.85	□□□□□ -0.19
RBM4-205	ENST00000409406	FMO5	P49326	533 aa		13.85	□□□□□ -0.19
RBM4-205	ENST00000409406	MAP2K5	Q13163	448 aa		13.85	□□□□□ -0.19
RBM4-205	ENST00000409406	ACVR2B	Q13705	512 aa		13.85	□□□□□ -0.19
RBM4-205	ENST00000409406	CAPS	Q13938	189 aa		13.85	□□□□□ -0.19
RBM4-205	ENST00000409406	E2F5	Q15329	346 aa		13.85	□□□□□ -0.19
RBM4-205	ENST00000409406	BRDT	Q58F21	947 aa	Predicted RBP	13.85	□□□□□ -0.19
RBM4-205	ENST00000409406	EMC10	Q5UCC4	262 aa		13.85	□□□□□ -0.19
RBM4-205	ENST00000409406	CCDC121	Q6ZUS5	278 aa		13.85	□□□□□ -0.19
RBM4-205	ENST00000409406	PPTC7	Q8NI37	304 aa		13.85	□□□□□ -0.19
RBM4-205	ENST00000409406	TRAPPC12	Q8WVT3	735 aa		13.85	□□□□□ -0.19
RBM4-205	ENST00000409406	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	13.85	□□□□□ -0.19
RBM4-205	ENST00000409406	FLRT1	Q9NZU1	646 aa		13.85	□□□□□ -0.19
RBM4-205	ENST00000409406	PPME1	Q9Y570	386 aa		13.85	□□□□□ -0.19
RBM4-205	ENST00000409406	KAT6A	Q92794	2004 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	GOLGA8IP	A6NC78	632 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	GOLGA8J	A6NMD2	632 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	FAM107A	O95990	144 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	KRT14	P02533	472 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	LGALS2	P05162	132 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	EDN1	P05305	212 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	NR1D1	P20393	614 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	KRT83	P78385	493 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	SLC7A5	Q01650	507 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	NAA25	Q14CX7	972 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	KLHDC7A	Q5VTJ3	777 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	CACNA2D4	Q7Z3S7	1137 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	CBWD2	Q8IUF1	395 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	GPIHBP1	Q8IV16	184 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	PRPF31	Q8WWY3	499 aa	Known RBP	13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	USP6NL	Q92738	828 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	FBXL18	Q96ME1	805 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	HAUS2	Q9NVX0	235 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	KLHL33	A6NCF5	533 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	LRRIQ4	A6NIV6	560 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	HNRNPDL	O14979	420 aa	Known RBP	13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	MAPK13	O15264	365 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	UCHL3	P15374	230 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	MRPS25	P82663	173 aa	Known RBP	13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	DUSP28	Q4G0W2	176 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	HGSNAT	Q68CP4	663 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	INTS8	Q75QN2	995 aa	Known RBP	13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	CREG2	Q8IUH2	290 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	KIRREL3	Q8IZU9	778 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	ZBTB10	Q96DT7	871 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	SAAL1	Q96ER3	474 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	C16orf70	Q9BSU1	422 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	ERAP1	Q9NZ08	941 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	GCNT4	Q9P109	453 aa		13.84	□□□□□ -0.19
RBM4-205	ENST00000409406	MGAM	O43451	1857 aa		13.83	□□□□□ -0.2
RBM4-205	ENST00000409406	RCCD1	A6NED2	376 aa		13.83	□□□□□ -0.2
RBM4-205	ENST00000409406	SRRM3	A6NNA2	597 aa	Predicted RBP	13.83	□□□□□ -0.2
RBM4-205	ENST00000409406		H0YCG3	227 aa		13.83	□□□□□ -0.2
RBM4-205	ENST00000409406	HBP1	O60381	514 aa		13.83	□□□□□ -0.2
RBM4-205	ENST00000409406	HOXC6	P09630	235 aa		13.83	□□□□□ -0.2
RBM4-205	ENST00000409406	TNFRSF8	P28908	595 aa		13.83	□□□□□ -0.2
RBM4-205	ENST00000409406	SLC8A1	P32418	973 aa		13.83	□□□□□ -0.2
RBM4-205	ENST00000409406	MDH1	P40925	334 aa	Known RBP	13.83	□□□□□ -0.2
RBM4-205	ENST00000409406	VAMP7	P51809	220 aa		13.83	□□□□□ -0.2
RBM4-205	ENST00000409406	ITIH3	Q06033	890 aa		13.83	□□□□□ -0.2
RBM4-205	ENST00000409406	PPP3CA	Q08209	521 aa		13.83	□□□□□ -0.2
RBM4-205	ENST00000409406	CRHR2	Q13324	411 aa		13.83	□□□□□ -0.2
RBM4-205	ENST00000409406	PRAMEF19	Q5SWL8	479 aa		13.83	□□□□□ -0.2
RBM4-205	ENST00000409406	LRRC71	Q8N4P6	559 aa		13.83	□□□□□ -0.2
RBM4-205	ENST00000409406	LACRT	Q9GZZ8	138 aa		13.83	□□□□□ -0.2
RBM4-205	ENST00000409406	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.83	□□□□□ -0.2
RBM4-205	ENST00000409406	TRPC6	Q9Y210	931 aa		13.83	□□□□□ -0.2
RBM4-205	ENST00000409406		E7EVH7	732 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	ZNF263	O14978	683 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	CTGF	P29279	349 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	GBP2	P32456	591 aa	Predicted RBP	13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	TM4SF4	P48230	202 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	SLC8A3	P57103	927 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	SNRNP35	Q16560	246 aa	Known RBP	13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	IER5	Q5VY09	327 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	LMO3	Q8TAP4	145 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	DEPTOR	Q8TB45	409 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	CYFIP2	Q96F07	1278 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	HAPLN2	Q9GZV7	340 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	STIM2	Q9P246	746 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	GJD2	Q9UKL4	321 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	ABT1	Q9ULW3	272 aa	Known RBP	13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	SNX12	Q9UMY4	172 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	STYXL1	Q9Y6J8	313 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	ZNF233	A6NK53	670 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406		K7ERI5	159 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	ADCY3	O60266	1144 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	PIGR	P01833	764 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	ZNF286B	P0CG31	522 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	HOXD8	P13378	290 aa	Predicted RBP	13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	KRT13	P13646	458 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	GART	P22102	1010 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	CCL14	Q16627	93 aa		13.82	□□□□□ -0.2
RBM4-205	ENST00000409406	SPRED3	Q2MJR0	410 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms