RNA–Protein interactions for RNA: ENST00000409299.7

PXMP4-203, Transcript of peroxisomal membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PXMP4, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-203ENST00000409299 CTSHP09668 335 aa12.9□□□□□ -0.34
PXMP4-203ENST00000409299 RARBP10826 455 aa12.9□□□□□ -0.34
PXMP4-203ENST00000409299 GTF2A2P52657 109 aa12.9□□□□□ -0.34
PXMP4-203ENST00000409299 VSNL1P62760 191 aa12.9□□□□□ -0.34
PXMP4-203ENST00000409299 HEATR6Q6AI08 1181 aaKnown RBP12.9□□□□□ -0.34
PXMP4-203ENST00000409299 SPATA21Q7Z572 469 aa12.9□□□□□ -0.34
PXMP4-203ENST00000409299 SYN2Q92777 582 aaPredicted RBP12.9□□□□□ -0.34
PXMP4-203ENST00000409299 MTBPQ96DY7 904 aa12.9□□□□□ -0.34
PXMP4-203ENST00000409299 TFRCP02786 760 aaKnown RBP12.9□□□□□ -0.35
PXMP4-203ENST00000409299 ITIH2P19823 946 aa12.9□□□□□ -0.35
PXMP4-203ENST00000409299 E2F4Q16254 413 aa12.9□□□□□ -0.35
PXMP4-203ENST00000409299 TMTC4Q5T4D3 741 aa12.9□□□□□ -0.35
PXMP4-203ENST00000409299 FBXO33Q7Z6M2 555 aa12.9□□□□□ -0.35
PXMP4-203ENST00000409299 CYTH2Q99418 400 aa12.9□□□□□ -0.35
PXMP4-203ENST00000409299 KATNAL1Q9BW62 490 aa12.9□□□□□ -0.35
PXMP4-203ENST00000409299 VCPKMTQ9H867 229 aa12.9□□□□□ -0.35
PXMP4-203ENST00000409299 NYAP2Q9P242 653 aa12.9□□□□□ -0.35
PXMP4-203ENST00000409299 H3BRJ5 948 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 EIF3HO15372 352 aaKnown RBP eCLIP12.89□□□□□ -0.35
PXMP4-203ENST00000409299 SNX2O60749 519 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 SLC25A27O95847 323 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 ATXN8OSP0DMR3 200 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 NOP14P78316 857 aaKnown RBP12.89□□□□□ -0.35
PXMP4-203ENST00000409299 KRT17Q04695 432 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 EFTUD2Q15029 972 aaKnown RBP eCLIP12.89□□□□□ -0.35
PXMP4-203ENST00000409299 KIAA1755Q5JYT7 1200 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 NUDCD3Q8IVD9 361 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 STAMBPL1Q96FJ0 436 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 YY1AP1Q9H869 796 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 SUCLA2Q9P2R7 463 aaPredicted RBP12.89□□□□□ -0.35
PXMP4-203ENST00000409299 FNDC3AQ9Y2H6 1198 aaKnown RBP12.89□□□□□ -0.35
PXMP4-203ENST00000409299 GOLGA8MH3BSY2 632 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 GH1P01241 217 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 MORF4L2Q15014 288 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 LLGL1Q15334 1064 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 RNF219Q5W0B1 726 aaPredicted RBP12.89□□□□□ -0.35
PXMP4-203ENST00000409299 AGGF1Q8N302 714 aaeCLIP12.89□□□□□ -0.35
PXMP4-203ENST00000409299 ROPN1BQ9BZX4 212 aaPredicted RBP12.89□□□□□ -0.35
PXMP4-203ENST00000409299 TRIM9Q9C026 710 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 ROPN1Q9HAT0 212 aaPredicted RBP12.89□□□□□ -0.35
PXMP4-203ENST00000409299 ZC3H13Q5T200 1668 aaKnown RBP12.89□□□□□ -0.35
PXMP4-203ENST00000409299 POTEFA5A3E0 1075 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 POTEIP0CG38 1075 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 TMED1Q13445 227 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 SLC12A1Q13621 1099 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 POTEGQ6S5H5 508 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 POTEEQ6S8J3 1075 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 ZBED8Q8IZ13 594 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 ICA1LQ8NDH6 482 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 FSD1LQ9BXM9 530 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 TRPV6Q9H1D0 765 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 ETNK1Q9HBU6 452 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 ZNF609O15014 1411 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 TMEM247A6NEH6 219 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 PSMD3O43242 534 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 TDP2O95551 362 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 IFNA8P32881 189 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 PSMC1P62191 440 aaKnown RBP12.89□□□□□ -0.35
PXMP4-203ENST00000409299 STILQ15468 1287 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 PPP6R3Q5H9R7 873 aaPredicted RBP12.89□□□□□ -0.35
PXMP4-203ENST00000409299 RGS9BPQ6ZS82 235 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 FRA10AC1Q70Z53 315 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 RRAGCQ9HB90 399 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 EML4Q9HC35 981 aaKnown RBP12.89□□□□□ -0.35
PXMP4-203ENST00000409299 ZNF212Q9UDV6 495 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 SNX5Q9Y5X3 404 aa12.89□□□□□ -0.35
PXMP4-203ENST00000409299 M0QYV0 167 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 TRADDQ15628 312 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 EDRF1Q3B7T1 1238 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 CCNI2Q6ZMN8 369 aaPredicted RBP12.88□□□□□ -0.35
PXMP4-203ENST00000409299 SRLQ86TD4 932 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 RIBC1Q8N443 379 aaPredicted RBP12.88□□□□□ -0.35
PXMP4-203ENST00000409299 MAGED2Q9UNF1 606 aaPredicted RBP12.88□□□□□ -0.35
PXMP4-203ENST00000409299 ZNF543Q08ER8 600 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 ZNF211Q13398 564 aaPredicted RBP12.88□□□□□ -0.35
PXMP4-203ENST00000409299 RWDD4Q6NW29 188 aaKnown RBP12.88□□□□□ -0.35
PXMP4-203ENST00000409299 STOX1Q6ZVD7 989 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 ZNF473Q8WTR7 871 aaKnown RBP12.88□□□□□ -0.35
PXMP4-203ENST00000409299 ZKSCAN4Q969J2 545 aaPredicted RBP12.88□□□□□ -0.35
PXMP4-203ENST00000409299 ABTB1Q969K4 478 aaPredicted RBP12.88□□□□□ -0.35
PXMP4-203ENST00000409299 RNF25Q96BH1 459 aaPredicted RBP12.88□□□□□ -0.35
PXMP4-203ENST00000409299 ACAP3Q96P50 834 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 BATF3Q9NR55 127 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 PIN4Q9Y237 131 aaKnown RBP12.88□□□□□ -0.35
PXMP4-203ENST00000409299 CPB1P15086 417 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 SCP2P22307 547 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 EFNA5P52803 228 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 HDAC4P56524 1084 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 CEP55Q53EZ4 464 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 RARS2Q5T160 578 aaKnown RBP12.88□□□□□ -0.35
PXMP4-203ENST00000409299 MMGT1Q8N4V1 131 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 C3orf20Q8ND61 904 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 HNRNPLLQ8WVV9 542 aaKnown RBP12.88□□□□□ -0.35
PXMP4-203ENST00000409299 SGSM3Q96HU1 749 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 VPS11Q9H270 941 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 WDR35Q9P2L0 1181 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 EMSYQ7Z589 1322 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 PIK3R2O00459 728 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 UPP2O95045 317 aa12.88□□□□□ -0.35
PXMP4-203ENST00000409299 MRPS25P82663 173 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms