RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 RTN4RL1Q86UN2 441 aaPredicted RBP14.15□□□□□ -0.14
LIMS2-203ENST00000409254 WDR49Q8IV35 697 aa14.15□□□□□ -0.14
LIMS2-203ENST00000409254 TRIM59Q8IWR1 403 aa14.15□□□□□ -0.14
LIMS2-203ENST00000409254 CNOT6LQ96LI5 555 aaKnown RBP14.15□□□□□ -0.14
LIMS2-203ENST00000409254 FAM213AQ9BRX8 229 aa14.15□□□□□ -0.14
LIMS2-203ENST00000409254 MRPL9Q9BYD2 267 aaKnown RBP14.15□□□□□ -0.14
LIMS2-203ENST00000409254 RSAD1Q9HA92 442 aa14.15□□□□□ -0.14
LIMS2-203ENST00000409254 SLC38A7Q9NVC3 462 aa14.15□□□□□ -0.14
LIMS2-203ENST00000409254 KANSL3Q9P2N6 904 aa14.15□□□□□ -0.14
LIMS2-203ENST00000409254 LRRC10BA6NIK2 292 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 P4HA2O15460 535 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 N4BP1O75113 896 aaKnown RBP14.14□□□□□ -0.15
LIMS2-203ENST00000409254 TPM2P07951 284 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 PAX3P23760 479 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 BMP8BP34820 402 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 CCDC40Q4G0X9 1142 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 TCP11X2Q5H9J9 407 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 GLB1LQ6UWU2 654 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 ZBTB33Q86T24 672 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 IRF2BP1Q8IU81 584 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 CBWD2Q8IUF1 395 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 THNSL1Q8IYQ7 743 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 CEP120Q8N960 986 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 PARD3BQ8TEW8 1205 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 TOP1MTQ969P6 601 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 SAAL1Q96ER3 474 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 FNBP1Q96RU3 617 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 IKZF4Q9H2S9 585 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 PCIF1Q9H4Z3 704 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 PCDHB7Q9Y5E2 793 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 TRANK1O15050 2925 aa14.14□□□□□ -0.15
LIMS2-203ENST00000409254 GTPBP10A4D1E9 387 aaKnown RBP14.13□□□□□ -0.15
LIMS2-203ENST00000409254 CXCL8P10145 99 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 CYP3A5P20815 502 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 CASP4P49662 377 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 ACOT2P49753 483 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 VAMP7P51809 220 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 GRIK3Q13003 919 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 MAN2A1Q16706 1144 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 UVSSAQ2YD98 709 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 SLC10A6Q3KNW5 377 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 AGMOQ6ZNB7 445 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 URGCPQ8TCY9 931 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 CACTINQ8WUQ7 758 aaKnown RBP14.13□□□□□ -0.15
LIMS2-203ENST00000409254 RPS6KC1Q96S38 1066 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 CGRRF1Q99675 332 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 GDF15Q99988 308 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 TMEM117Q9H0C3 514 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 HSD3B7Q9H2F3 369 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 FANCLQ9NW38 375 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 LIMA1Q9UHB6 759 aaKnown RBP14.13□□□□□ -0.15
LIMS2-203ENST00000409254 LRFN2Q9ULH4 789 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 ZMYND8Q9ULU4 1186 aaPredicted RBP14.13□□□□□ -0.15
LIMS2-203ENST00000409254 USP20Q9Y2K6 914 aa14.13□□□□□ -0.15
LIMS2-203ENST00000409254 KCNJ18B7U540 433 aa14.12□□□□□ -0.15
LIMS2-203ENST00000409254 HARSP12081 509 aaKnown RBP14.12□□□□□ -0.15
LIMS2-203ENST00000409254 TNFSF9P41273 254 aa14.12□□□□□ -0.15
LIMS2-203ENST00000409254 MAGEA10P43363 369 aaPredicted RBP14.12□□□□□ -0.15
LIMS2-203ENST00000409254 KCNJ12Q14500 433 aa14.12□□□□□ -0.15
LIMS2-203ENST00000409254 TCTN1Q2MV58 587 aa14.12□□□□□ -0.15
LIMS2-203ENST00000409254 ZNF365Q70YC5 407 aa14.12□□□□□ -0.15
LIMS2-203ENST00000409254 C16orf59Q7L2K0 433 aa14.12□□□□□ -0.15
LIMS2-203ENST00000409254 LUZP1Q86V48 1076 aa14.12□□□□□ -0.15
LIMS2-203ENST00000409254 CDR2LQ86X02 465 aaPredicted RBP14.12□□□□□ -0.15
LIMS2-203ENST00000409254 ABI1Q8IZP0 508 aa14.12□□□□□ -0.15
LIMS2-203ENST00000409254 SLC35C1Q96A29 364 aa14.12□□□□□ -0.15
LIMS2-203ENST00000409254 FAXDC2Q96IV6 333 aa14.12□□□□□ -0.15
LIMS2-203ENST00000409254 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.12□□□□□ -0.15
LIMS2-203ENST00000409254 RC3H2Q9HBD1 1191 aaKnown RBP14.12□□□□□ -0.15
LIMS2-203ENST00000409254 SNTG2Q9NY99 539 aa14.12□□□□□ -0.15
LIMS2-203ENST00000409254 UBQLN1Q9UMX0 589 aaKnown RBP14.12□□□□□ -0.15
LIMS2-203ENST00000409254 DAAM1Q9Y4D1 1078 aa14.12□□□□□ -0.15
LIMS2-203ENST00000409254 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.12□□□□□ -0.15
LIMS2-203ENST00000409254 TSC2P49815 1807 aa14.11□□□□□ -0.15
LIMS2-203ENST00000409254 ARL5CA6NH57 179 aa14.11□□□□□ -0.15
LIMS2-203ENST00000409254 SYN1P17600 705 aa14.11□□□□□ -0.15
LIMS2-203ENST00000409254 HTRA4P83105 476 aaPredicted RBP14.11□□□□□ -0.15
LIMS2-203ENST00000409254 CETN1Q12798 172 aa14.11□□□□□ -0.15
LIMS2-203ENST00000409254 TMEM132DQ14C87 1099 aa14.11□□□□□ -0.15
LIMS2-203ENST00000409254 ZBTB6Q15916 424 aa14.11□□□□□ -0.15
LIMS2-203ENST00000409254 DUOXA2Q1HG44 320 aa14.11□□□□□ -0.15
LIMS2-203ENST00000409254 ZBTB41Q5SVQ8 909 aa14.11□□□□□ -0.15
LIMS2-203ENST00000409254 SARM1Q6SZW1 724 aa14.11□□□□□ -0.15
LIMS2-203ENST00000409254 CMTR2Q8IYT2 770 aaKnown RBP14.11□□□□□ -0.15
LIMS2-203ENST00000409254 LRRC43Q8N309 656 aa14.11□□□□□ -0.15
LIMS2-203ENST00000409254 ANKRD36BP1Q96IX9 119 aa14.11□□□□□ -0.15
LIMS2-203ENST00000409254 UROC1Q96N76 676 aa14.11□□□□□ -0.15
LIMS2-203ENST00000409254 PPP1R10Q96QC0 940 aaKnown RBP14.11□□□□□ -0.15
LIMS2-203ENST00000409254 TUBGCP2Q9BSJ2 902 aa14.11□□□□□ -0.15
LIMS2-203ENST00000409254 FAM124BQ9H5Z6 455 aaPredicted RBP14.11□□□□□ -0.15
LIMS2-203ENST00000409254 TMEM8AQ9HCN3 771 aa14.11□□□□□ -0.15
LIMS2-203ENST00000409254 SAMSN1Q9NSI8 373 aaKnown RBP14.11□□□□□ -0.15
LIMS2-203ENST00000409254 ITGA11Q9UKX5 1188 aa14.11□□□□□ -0.15
LIMS2-203ENST00000409254 HES2Q9Y543 173 aa14.11□□□□□ -0.15
LIMS2-203ENST00000409254 CHD9Q3L8U1 2897 aa14.11□□□□□ -0.15
LIMS2-203ENST00000409254 CHD7Q9P2D1 2997 aa14.1□□□□□ -0.15
LIMS2-203ENST00000409254 MYO9BQ13459 2157 aa14.1□□□□□ -0.15
LIMS2-203ENST00000409254 A0A1W2PPC1 479 aa14.1□□□□□ -0.15
LIMS2-203ENST00000409254 GOLGA8IPA6NC78 632 aa14.1□□□□□ -0.15
LIMS2-203ENST00000409254 GOLGA8JA6NMD2 632 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms