RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 CAPSQ13938 189 aa9.04□□□□□ -0.96
SH3D19-202ENST00000409252 ZPBP2Q6X784 338 aa9.04□□□□□ -0.96
SH3D19-202ENST00000409252 DCP1BQ8IZD4 617 aaKnown RBP9.04□□□□□ -0.96
SH3D19-202ENST00000409252 ZIC5Q96T25 663 aa9.04□□□□□ -0.96
SH3D19-202ENST00000409252 SEPT5Q99719 369 aaPredicted RBP9.04□□□□□ -0.96
SH3D19-202ENST00000409252 FTHL17Q9BXU8 183 aa9.04□□□□□ -0.96
SH3D19-202ENST00000409252 CENPHQ9H3R5 247 aa9.04□□□□□ -0.96
SH3D19-202ENST00000409252 AMFRQ9UKV5 643 aa9.04□□□□□ -0.96
SH3D19-202ENST00000409252 TTLL3Q9Y4R7 772 aa9.04□□□□□ -0.96
SH3D19-202ENST00000409252 EPN1Q9Y6I3 576 aaPredicted RBP9.04□□□□□ -0.96
SH3D19-202ENST00000409252 CTAGE15A4D2H0 777 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 CTAGE8P0CG41 777 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 CDC25BP30305 580 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 SYT10Q6XYQ8 523 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 CTAGE6Q86UF2 777 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 DHX40Q8IX18 779 aaKnown RBP9.03□□□□□ -0.96
SH3D19-202ENST00000409252 CTAGE4Q8IX94 777 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 TNS4Q8IZW8 715 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 NAP1L3Q99457 506 aaPredicted RBP9.03□□□□□ -0.96
SH3D19-202ENST00000409252 HAUS2Q9NVX0 235 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 FAN1Q9Y2M0 1017 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 CNMDO75829 334 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 ARIH2O95376 493 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 SRGAP2BP0DMP2 458 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 EIF4A3P38919 411 aaKnown RBP9.03□□□□□ -0.96
SH3D19-202ENST00000409252 RPS6KA1Q15418 735 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 PPP1R7Q15435 360 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 SEPT7Q16181 437 aaKnown RBP9.03□□□□□ -0.96
SH3D19-202ENST00000409252 LRRC8DQ7L1W4 858 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 OTUD6BQ8N6M0 293 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 MRPL47Q9HD33 250 aaKnown RBP9.03□□□□□ -0.96
SH3D19-202ENST00000409252 PPP1R3GB7ZBB8 358 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 LYPLA2O95372 231 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 SNAI1O95863 264 aaPredicted RBP9.03□□□□□ -0.96
SH3D19-202ENST00000409252 NEFHP12036 1026 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 KIAA0319LQ8IZA0 1049 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 CGRRF1Q99675 332 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 NIF3L1Q9GZT8 377 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 SAGE1Q9NXZ1 904 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 ST3GAL5Q9UNP4 418 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 Q9Y3F1 56 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 LRRC53A6NM62 1247 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 FAM193AP78312 1265 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 MESDQ14696 234 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 TOGARAM2Q6ZUX3 1019 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 MAP4K3Q8IVH8 894 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 PSMB7Q99436 277 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 NAPGQ99747 312 aaPredicted RBP9.03□□□□□ -0.96
SH3D19-202ENST00000409252 TRMT13Q9NUP7 481 aaKnown RBP9.03□□□□□ -0.96
SH3D19-202ENST00000409252 MSRAQ9UJ68 235 aa9.03□□□□□ -0.96
SH3D19-202ENST00000409252 TUBB4AP04350 444 aa9.02□□□□□ -0.96
SH3D19-202ENST00000409252 ALDH2P05091 517 aa9.02□□□□□ -0.96
SH3D19-202ENST00000409252 MGAT5BQ3V5L5 792 aa9.02□□□□□ -0.96
SH3D19-202ENST00000409252 PI4K2AQ9BTU6 479 aa9.02□□□□□ -0.96
SH3D19-202ENST00000409252 TMEM134Q9H6X4 195 aa9.02□□□□□ -0.96
SH3D19-202ENST00000409252 APEX2Q9UBZ4 518 aa9.02□□□□□ -0.96
SH3D19-202ENST00000409252 ZMYND8Q9ULU4 1186 aaPredicted RBP9.02□□□□□ -0.96
SH3D19-202ENST00000409252 MAFBQ9Y5Q3 323 aaPredicted RBP9.02□□□□□ -0.96
SH3D19-202ENST00000409252 H7C4K7 107 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 CEP104O60308 925 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 DNAJB2P25686 324 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 CASP4P49662 377 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 ZNF200P98182 395 aaPredicted RBP9.02□□□□□ -0.97
SH3D19-202ENST00000409252 AMHR2Q16671 573 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 PXYLP1Q8TE99 480 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 SEZ6LQ9BYH1 1024 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 ADAM22Q9P0K1 906 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 E7EVH7 732 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 MCM3P25205 808 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 GBP2P32456 591 aaPredicted RBP9.02□□□□□ -0.97
SH3D19-202ENST00000409252 SSTR3P32745 418 aaPredicted RBP9.02□□□□□ -0.97
SH3D19-202ENST00000409252 CYP24A1Q07973 514 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 E2F4Q16254 413 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 TMC7Q7Z402 723 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 C4orf32Q8N8J7 132 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 MFAP3LO75121 409 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 RECQL4O94761 1208 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 BCAR1P56945 870 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 PCBP1Q15365 356 aaKnown RBP eCLIP9.02□□□□□ -0.97
SH3D19-202ENST00000409252 NPY5RQ15761 445 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 CDO1Q16878 200 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 C4orf50Q6ZRC1 276 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 PDZD4Q76G19 769 aaPredicted RBP9.02□□□□□ -0.97
SH3D19-202ENST00000409252 WDR49Q8IV35 697 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 USP38Q8NB14 1042 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 KIAA0895Q8NCT3 520 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 ZBTB45Q96K62 511 aaPredicted RBP9.02□□□□□ -0.97
SH3D19-202ENST00000409252 C11orf70Q9BRQ4 267 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 NHEJ1Q9H9Q4 299 aaPredicted RBP9.02□□□□□ -0.97
SH3D19-202ENST00000409252 IFT122Q9HBG6 1241 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 LIMA1Q9UHB6 759 aaKnown RBP9.02□□□□□ -0.97
SH3D19-202ENST00000409252 PAXBP1Q9Y5B6 917 aa9.02□□□□□ -0.97
SH3D19-202ENST00000409252 TEX33O43247 280 aa9.01□□□□□ -0.97
SH3D19-202ENST00000409252 WEE2P0C1S8 567 aa9.01□□□□□ -0.97
SH3D19-202ENST00000409252 NOVP48745 357 aa9.01□□□□□ -0.97
SH3D19-202ENST00000409252 PTENP60484 403 aa9.01□□□□□ -0.97
SH3D19-202ENST00000409252 PPIGQ13427 754 aaKnown RBP eCLIP9.01□□□□□ -0.971e-6■□□□□ 10.1
SH3D19-202ENST00000409252 ECM1Q16610 540 aa9.01□□□□□ -0.97
SH3D19-202ENST00000409252 CFAP58Q5T655 872 aa9.01□□□□□ -0.97
SH3D19-202ENST00000409252 RBBP8NLQ8NC74 664 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms