RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 PDE2AO00408 941 aaPredicted RBP18.66■□□□□ 0.58
SMPD4-202ENST00000409031 TBC1D10BQ4KMP7 808 aaPredicted RBP18.66■□□□□ 0.58
SMPD4-202ENST00000409031 C16orf89Q6UX73 402 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 TRIM67Q6ZTA4 783 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 RCOR2Q8IZ40 523 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 TRAPPC9Q96Q05 1148 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 ADAM33Q9BZ11 813 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 CPVLQ9H3G5 476 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 KIAA1586Q9HCI6 787 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 WHRNQ9P202 907 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 PFDN6O15212 129 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 ALAS1P13196 640 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 NMD3Q96D46 503 aaKnown RBP18.66■□□□□ 0.58
SMPD4-202ENST00000409031 SIKE1Q9BRV8 207 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 OLFML3Q9NRN5 406 aa18.66■□□□□ 0.58
SMPD4-202ENST00000409031 A0A0A6YYK5 440 aaPredicted RBP18.65■□□□□ 0.58
SMPD4-202ENST00000409031 FAM237AA0A1B0GTK4 181 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 SLC26A4O43511 780 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 TAC1P20366 129 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 TYK2P29597 1187 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 MRPS15P82914 257 aaKnown RBP18.65■□□□□ 0.58
SMPD4-202ENST00000409031 ZNF662Q6ZS27 426 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 HSPH1Q92598 858 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 ANKRD36BP1Q96IX9 119 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 CEP170P1Q96L14 293 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 LIN7AO14910 233 aaPredicted RBP18.65■□□□□ 0.58
SMPD4-202ENST00000409031 PJA2O43164 708 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 SHOX2O60902 331 aaPredicted RBP18.65■□□□□ 0.58
SMPD4-202ENST00000409031 COPB2P35606 906 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 RFC5P40937 340 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 ZNF512BQ96KM6 892 aaPredicted RBP18.65■□□□□ 0.58
SMPD4-202ENST00000409031 INTS13Q9NVM9 706 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 KBTBD4Q9NVX7 518 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 BTG4Q9NY30 223 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 MARCOQ9UEW3 520 aaPredicted RBP18.65■□□□□ 0.58
SMPD4-202ENST00000409031 CD58P19256 250 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 PTENP60484 403 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 ZNF200P98182 395 aaPredicted RBP18.65■□□□□ 0.58
SMPD4-202ENST00000409031 OR6B2Q6IFH4 312 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 PDXDC2PQ6P474 469 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 CDC42EP4Q9H3Q1 356 aaKnown RBP18.65■□□□□ 0.58
SMPD4-202ENST00000409031 DDX28Q9NUL7 540 aaKnown RBP18.65■□□□□ 0.58
SMPD4-202ENST00000409031 SMARCA1P28370 1054 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 TPP2P29144 1249 aaPredicted RBP18.65■□□□□ 0.58
SMPD4-202ENST00000409031 PEX3P56589 373 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 ABCB5Q2M3G0 1257 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 NGLY1Q96IV0 654 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 ZSWIM1Q9BR11 485 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 SLC9A2Q9UBY0 812 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 SUN2Q9UH99 717 aa18.65■□□□□ 0.58
SMPD4-202ENST00000409031 TULP4Q9NRJ4 1543 aa18.64■□□□□ 0.58
SMPD4-202ENST00000409031 A8MXQ7 604 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 KRT8P05787 483 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 AMPD2Q01433 879 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 KIF19Q2TAC6 998 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 ERMARDQ5T6L9 678 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 CCDC24Q8N4L8 307 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 INPP5DQ92835 1189 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 E2F7Q96AV8 911 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 RPS6KC1Q96S38 1066 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 SEMA4AQ9H3S1 761 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 ATP11BQ9Y2G3 1177 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 MYBL2P10244 700 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 PRAMEP78395 509 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 CENPPQ6IPU0 288 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 APOL6Q9BWW8 343 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 CCDC90BQ9GZT6 254 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 ITGB1BP2Q9UKP3 347 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 PI4K2BG5E9Z4 385 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 CYP26A1O43174 497 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 SNX3O60493 162 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 KRT4P19013 534 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 RFX5P48382 616 aaPredicted RBP18.64■□□□□ 0.57
SMPD4-202ENST00000409031 UBXN2AP68543 259 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 JDP2Q8WYK2 163 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 VPS39Q96JC1 886 aa18.64■□□□□ 0.57
SMPD4-202ENST00000409031 USP17L5A8MUK1 530 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 COPAP53621 1224 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 TRIM28Q13263 835 aaKnown RBP18.63■□□□□ 0.57
SMPD4-202ENST00000409031 SURF1Q15526 300 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 THEMIS2Q5TEJ8 643 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 C3orf62Q6ZUJ4 267 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 MTDHQ86UE4 582 aaKnown RBP18.63■□□□□ 0.57
SMPD4-202ENST00000409031 GALNT4Q8N4A0 578 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 SLC7A3Q8WY07 619 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 SH3GL2Q99962 352 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 PARVAQ9NVD7 372 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 ASNSD1Q9NWL6 643 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 CYP39A1Q9NYL5 469 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 BTBD7Q9P203 1132 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 ASAP1Q9ULH1 1129 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 SPHKAPQ2M3C7 1700 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 SERPINB8P50452 374 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 GEMIN4P57678 1058 aaKnown RBP18.63■□□□□ 0.57
SMPD4-202ENST00000409031 PTK7Q13308 1070 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 TMEM270Q6UE05 265 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 PASD1Q8IV76 773 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 ISCA1Q9BUE6 129 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 CDC42BPAQ5VT25 1732 aa18.63■□□□□ 0.57
SMPD4-202ENST00000409031 BMP3P12645 472 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms