RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 PAAF1Q9BRP4 392 aa11.23□□□□□ -0.61
TSPAN9-202ENST00000407263 ST6GALNAC4Q9H4F1 302 aa11.23□□□□□ -0.61
TSPAN9-202ENST00000407263 GOLGA2P5Q9HBQ8 144 aa11.23□□□□□ -0.61
TSPAN9-202ENST00000407263 SLC39A2Q9NP94 309 aa11.23□□□□□ -0.61
TSPAN9-202ENST00000407263 PRDM6Q9NQX0 595 aa11.23□□□□□ -0.61
TSPAN9-202ENST00000407263 ENTPD7Q9NQZ7 604 aa11.23□□□□□ -0.61
TSPAN9-202ENST00000407263 TLR9Q9NR96 1032 aa11.23□□□□□ -0.61
TSPAN9-202ENST00000407263 TOPORSQ9NS56 1045 aaPredicted RBP11.23□□□□□ -0.61
TSPAN9-202ENST00000407263 MARCH5Q9NX47 278 aa11.23□□□□□ -0.61
TSPAN9-202ENST00000407263 SPG21Q9NZD8 308 aa11.23□□□□□ -0.61
TSPAN9-202ENST00000407263 KANSL3Q9P2N6 904 aa11.23□□□□□ -0.61
TSPAN9-202ENST00000407263 EXOC7Q9UPT5 735 aa11.23□□□□□ -0.61
TSPAN9-202ENST00000407263 MTCL1Q9Y4B5 1905 aaKnown RBP11.23□□□□□ -0.61
TSPAN9-202ENST00000407263 NRP1O14786 923 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 KLRC4O43908 158 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 UBE4BO95155 1302 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 SCP2P22307 547 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 ABCD1P33897 745 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 FAM160A1Q05DH4 1040 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 PPP2R3AQ06190 1150 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 DSC1Q08554 894 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 TUSC3Q13454 348 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 PNOCQ13519 176 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 CAMK1Q14012 370 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 TCEAL5Q5H9L2 206 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 CNNM4Q6P4Q7 775 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 STXBP4Q6ZWJ1 553 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 FMR1NBQ8N0W7 255 aaPredicted RBP11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 KIAA0895Q8NCT3 520 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 POMGNT1Q8WZA1 660 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 ERCC4Q92889 916 aaPredicted RBP11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 FAM212AQ96EL1 285 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 SAAL1Q96ER3 474 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 IGSF21Q96ID5 467 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 TCF25Q9BQ70 676 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 TMEM175Q9BSA9 504 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 STRA6Q9BX79 667 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 VN1R3Q9BXE9 311 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 LMAN2LQ9H0V9 348 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 NSUN3Q9H649 340 aaKnown RBP11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 PCDHB13Q9Y5F0 798 aa11.22□□□□□ -0.61
TSPAN9-202ENST00000407263 A0A0B4J269 797 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 GOLGA8IPA6NC78 632 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 GOLGA8JA6NMD2 632 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 OGTO15294 1046 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 EIF3DO15371 548 aaKnown RBP eCLIP11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 FAM189A1O60320 539 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 NR1I2O75469 434 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 KIF4AO95239 1232 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 RPN1P04843 607 aaKnown RBP11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 THP07101 528 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 POU3F3P20264 500 aaPredicted RBP11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 GTF2F1P35269 517 aaKnown RBP eCLIP11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 ACOT2P49753 483 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 ERVFC1P60507 584 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 PLCB3Q01970 1234 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 KRT17Q04695 432 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 SOX4Q06945 474 aaPredicted RBP11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 EHHADHQ08426 723 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 DPYDQ12882 1025 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 POSTNQ15063 836 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 ENOX2Q16206 610 aaKnown RBP11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 ARMCX5Q6P1M9 558 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 EP400NLQ6ZTU2 488 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 TMEM87AQ8NBN3 555 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 ZSWIM2Q8NEG5 633 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 MICAL1Q8TDZ2 1067 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 SCFD1Q8WVM8 642 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 AUTS2Q8WXX7 1259 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 ZMAT2Q96NC0 199 aaKnown RBP11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 PPP1R10Q96QC0 940 aaKnown RBP11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 CBWD1Q9BRT8 395 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 CNTN3Q9P232 1028 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 TUBGCP4Q9UGJ1 667 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 AGO2Q9UKV8 859 aaKnown RBP11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 FAN1Q9Y2M0 1017 aa11.21□□□□□ -0.61
TSPAN9-202ENST00000407263 COL6A3P12111 3177 aa11.21□□□□□ -0.62
TSPAN9-202ENST00000407263 SMIM28A0A1B0GU29 152 aa11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 PVALEFA0A1B0GWK0 134 aa11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 ADSSP30520 456 aa11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 HOXD13P35453 343 aa11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 UBE3AQ05086 875 aa11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 SNW1Q13573 536 aaKnown RBP11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 HSP90AA2PQ14568 343 aaPredicted RBP11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 NAB2Q15742 525 aa11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 SLC10A6Q3KNW5 377 aa11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 SLFN12LQ6IEE8 588 aa11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 EPM2AIP1Q7L775 607 aaPredicted RBP11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 RBM23Q86U06 439 aaKnown RBP11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 VPS52Q8N1B4 723 aa11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 ENGASEQ8NFI3 743 aa11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 CCDC47Q96A33 483 aaKnown RBP11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 C18orf25Q96B23 403 aaPredicted RBP11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 KIF12Q96FN5 646 aa11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 B3GALT6Q96L58 329 aa11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 FAM213AQ9BRX8 229 aa11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 ZBP1Q9H171 429 aa11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 PCIF1Q9H4Z3 704 aa11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 TMEM206Q9H813 350 aa11.2□□□□□ -0.62
TSPAN9-202ENST00000407263 RPF1Q9H9Y2 349 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms