RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 CNGA2Q16280 664 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 PLA2G4FQ68DD2 849 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 MCF2L2Q86YR7 1114 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 PLCD3Q8N3E9 789 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 TMEM161BQ8NDZ6 487 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 TAS1R2Q8TE23 839 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 C7orf43Q8WVR3 580 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 C1orf54Q8WWF1 131 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 DHX38Q92620 1227 aaKnown RBP19.75■□□□□ 0.75
EWSR1-207ENST00000406548 CNKSR1Q969H4 720 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 ZKSCAN4Q969J2 545 aaPredicted RBP19.75■□□□□ 0.75
EWSR1-207ENST00000406548 NSRP1Q9H0G5 558 aaKnown RBP19.75■□□□□ 0.75
EWSR1-207ENST00000406548 TOPORSQ9NS56 1045 aaPredicted RBP19.75■□□□□ 0.75
EWSR1-207ENST00000406548 RAB20Q9NX57 234 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 TBC1D12O60347 775 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 PSMC5P62195 406 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 GHRHRQ02643 423 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 SNCBQ16143 134 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 CLEC16AQ2KHT3 1053 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 SPDYE2Q495Y8 402 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 CCDC38Q502W7 563 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 XKR9Q5GH70 373 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 RSBN1LQ6PCB5 846 aaPredicted RBP19.75■□□□□ 0.75
EWSR1-207ENST00000406548 TRMT1LQ7Z2T5 733 aaKnown RBP19.75■□□□□ 0.75
EWSR1-207ENST00000406548 SUPT20HQ8NEM7 779 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 DDX23Q9BUQ8 820 aaKnown RBP19.75■□□□□ 0.75
EWSR1-207ENST00000406548 KIFC3Q9BVG8 833 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 MTFR1LQ9H019 292 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 AAASQ9NRG9 546 aa19.75■□□□□ 0.75
EWSR1-207ENST00000406548 TNS1Q9HBL0 1735 aaKnown RBP19.75■□□□□ 0.75
EWSR1-207ENST00000406548 TP73O15350 636 aa19.74■□□□□ 0.75
EWSR1-207ENST00000406548 GRIN3BO60391 1043 aa19.74■□□□□ 0.75
EWSR1-207ENST00000406548 VIMP08670 466 aaKnown RBP19.74■□□□□ 0.75
EWSR1-207ENST00000406548 CNGA1P29973 690 aa19.74■□□□□ 0.75
EWSR1-207ENST00000406548 IFNAR2P48551 515 aa19.74■□□□□ 0.75
EWSR1-207ENST00000406548 LLGL1Q15334 1064 aa19.74■□□□□ 0.75
EWSR1-207ENST00000406548 EXOC3L1Q86VI1 746 aa19.74■□□□□ 0.75
EWSR1-207ENST00000406548 TMC2Q8TDI7 906 aa19.74■□□□□ 0.75
EWSR1-207ENST00000406548 VEZTQ9HBM0 779 aa19.74■□□□□ 0.75
EWSR1-207ENST00000406548 ASIC3Q9UHC3 531 aa19.74■□□□□ 0.75
EWSR1-207ENST00000406548 ANAPC7Q9UJX3 599 aa19.74■□□□□ 0.75
EWSR1-207ENST00000406548 MAPK4P31152 587 aa19.74■□□□□ 0.75
EWSR1-207ENST00000406548 NPTX2P47972 431 aa19.74■□□□□ 0.75
EWSR1-207ENST00000406548 DMP1Q13316 513 aaPredicted RBP19.74■□□□□ 0.75
EWSR1-207ENST00000406548 LONRF1Q17RB8 773 aa19.74■□□□□ 0.75
EWSR1-207ENST00000406548 RHBDF2Q6PJF5 856 aa19.74■□□□□ 0.75
EWSR1-207ENST00000406548 SYTL5Q8TDW5 730 aaPredicted RBP19.74■□□□□ 0.75
EWSR1-207ENST00000406548 ELAC2Q9BQ52 826 aaKnown RBP19.74■□□□□ 0.75
EWSR1-207ENST00000406548 TMEM39BQ9GZU3 492 aa19.74■□□□□ 0.75
EWSR1-207ENST00000406548 DENND3A2RUS2 1198 aa19.73■□□□□ 0.75
EWSR1-207ENST00000406548 ACSL3O95573 720 aa19.73■□□□□ 0.75
EWSR1-207ENST00000406548 GSTA1P08263 222 aa19.73■□□□□ 0.75
EWSR1-207ENST00000406548 GTF2H1P32780 548 aa19.73■□□□□ 0.75
EWSR1-207ENST00000406548 RDXP35241 583 aaKnown RBP19.73■□□□□ 0.75
EWSR1-207ENST00000406548 JAK3P52333 1124 aa19.73■□□□□ 0.75
EWSR1-207ENST00000406548 MKRN4PQ13434 485 aaPredicted RBP19.73■□□□□ 0.75
EWSR1-207ENST00000406548 SNX1Q13596 522 aa19.73■□□□□ 0.75
EWSR1-207ENST00000406548 CCDC50Q8IVM0 306 aa19.73■□□□□ 0.75
EWSR1-207ENST00000406548 MFSD14AQ96MC6 490 aa19.73■□□□□ 0.75
EWSR1-207ENST00000406548 HOMER3Q9NSC5 361 aa19.73■□□□□ 0.75
EWSR1-207ENST00000406548 ANKEF1Q9NU02 776 aa19.73■□□□□ 0.75
EWSR1-207ENST00000406548 KRT5P13647 590 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 EIF2AK2P19525 551 aaKnown RBP19.72■□□□□ 0.75
EWSR1-207ENST00000406548 ITIH2P19823 946 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 MAN1A1P33908 653 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 POTEAQ6S8J7 498 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 SYDE1Q6ZW31 735 aaPredicted RBP19.72■□□□□ 0.75
EWSR1-207ENST00000406548 USP37Q86T82 979 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 ELMO3Q96BJ8 720 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 SNF8Q96H20 258 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 FBXL18Q96ME1 805 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 SERPINB12Q96P63 405 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 NCAPGQ9BPX3 1015 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 CHST7Q9NS84 486 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.72■□□□□ 0.75
EWSR1-207ENST00000406548 TCEAL9Q9UHQ7 104 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 SLC12A4Q9UP95 1085 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 WDR64B1ANS9 1081 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 CHKAP35790 457 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 CYP24A1Q07973 514 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 SF3A3Q12874 501 aaKnown RBP eCLIP19.72■□□□□ 0.756e-7■■■□□ 16.1
EWSR1-207ENST00000406548 PTK6Q13882 451 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 SV2AQ7L0J3 742 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 CPXCR1Q8N123 301 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 MAIP1Q8WWC4 291 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 ZNF341Q9BYN7 854 aa19.72■□□□□ 0.75
EWSR1-207ENST00000406548 CCNE2O96020 404 aa19.71■□□□□ 0.75
EWSR1-207ENST00000406548 ASNSP08243 561 aa19.71■□□□□ 0.75
EWSR1-207ENST00000406548 SFNP31947 248 aa19.71■□□□□ 0.75
EWSR1-207ENST00000406548 PGM5Q15124 567 aa19.71■□□□□ 0.75
EWSR1-207ENST00000406548 SLC39A4Q6P5W5 647 aa19.71■□□□□ 0.75
EWSR1-207ENST00000406548 ATG4AQ8WYN0 398 aa19.71■□□□□ 0.75
EWSR1-207ENST00000406548 ARHGEF2Q92974 986 aaKnown RBP19.71■□□□□ 0.75
EWSR1-207ENST00000406548 TAAR1Q96RJ0 339 aa19.71■□□□□ 0.75
EWSR1-207ENST00000406548 KMT5AQ9NQR1 393 aa19.71■□□□□ 0.75
EWSR1-207ENST00000406548 AVENQ9NQS1 362 aaPredicted RBP19.71■□□□□ 0.75
EWSR1-207ENST00000406548 HOMER2Q9NSB8 354 aa19.71■□□□□ 0.75
EWSR1-207ENST00000406548 TPX2Q9ULW0 747 aaKnown RBP19.71■□□□□ 0.75
EWSR1-207ENST00000406548 ATP9AO75110 1047 aa19.71■□□□□ 0.75
EWSR1-207ENST00000406548 UNGP13051 313 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms