RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 TRIP11Q15643 1979 aa11.34□□□□□ -0.59
FAM49A-202ENST00000406434 CASTOR2A6NHX0 329 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 F8W810 466 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 K7ENM7 598 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 TNFRSF10AO00220 468 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 TRAK2O60296 914 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 CLASP2O75122 1294 aaKnown RBP11.33□□□□□ -0.6
FAM49A-202ENST00000406434 GLP2RO95838 553 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 MAPTP10636 758 aaKnown RBP11.33□□□□□ -0.6
FAM49A-202ENST00000406434 YARSP54577 528 aaKnown RBP11.33□□□□□ -0.6
FAM49A-202ENST00000406434 DSC1Q08554 894 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 KIAA1841Q6NSI8 718 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 MPZL3Q6UWV2 235 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 FAM178BQ8IXR5 827 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 CEP120Q8N960 986 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 VN1R3Q9BXE9 311 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 ZBP1Q9H171 429 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 CDT1Q9H211 546 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 PTPRHQ9HD43 1115 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 MARCH5Q9NX47 278 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 CLEC1BQ9P126 229 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 ANKFY1Q9P2R3 1169 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 STK17AQ9UEE5 414 aa11.33□□□□□ -0.6
FAM49A-202ENST00000406434 MYMKA6NI61 221 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 PTGESO14684 152 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 CLDN3O15551 220 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 MBTPS2O43462 519 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 CUTAO60888 179 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 PPP6R2O75170 966 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 YEATS4O95619 227 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 SRGAP2BP0DMP2 458 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 MCF2P10911 925 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 IDEP14735 1019 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 KLRC2P26717 231 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 NMT1P30419 496 aaKnown RBP11.32□□□□□ -0.6
FAM49A-202ENST00000406434 SSTR3P32745 418 aaPredicted RBP11.32□□□□□ -0.6
FAM49A-202ENST00000406434 GRM5P41594 1212 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 NCKAP1LP55160 1127 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 DNM1Q05193 864 aaKnown RBP11.32□□□□□ -0.6
FAM49A-202ENST00000406434 TUSC3Q13454 348 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 SEZ6Q53EL9 994 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 GLRA4Q5JXX5 417 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 VN1R2Q8NFZ6 395 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 HASPINQ8TF76 798 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 DDX12PQ92771 950 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 STAMQ92783 540 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 ACAP3Q96P50 834 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 PAAF1Q9BRP4 392 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 EMILIN2Q9BXX0 1053 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 MRPL17Q9NRX2 175 aaKnown RBP11.32□□□□□ -0.6
FAM49A-202ENST00000406434 TBC1D7Q9P0N9 293 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 CFAP45Q9UL16 551 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 TBX20Q9UMR3 447 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 XIRP2A4UGR9 3374 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 CUL9Q8IWT3 2517 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 MYH15Q9Y2K3 1946 aa11.32□□□□□ -0.6
FAM49A-202ENST00000406434 A0A087X0B3 334 aa11.31□□□□□ -0.6
FAM49A-202ENST00000406434 FSD2A1L4K1 749 aa11.31□□□□□ -0.6
FAM49A-202ENST00000406434 TOM1L1O75674 476 aa11.31□□□□□ -0.6
FAM49A-202ENST00000406434 SOD2P04179 222 aa11.31□□□□□ -0.6
FAM49A-202ENST00000406434 ME1P48163 572 aa11.31□□□□□ -0.6
FAM49A-202ENST00000406434 LIG4P49917 911 aa11.31□□□□□ -0.6
FAM49A-202ENST00000406434 ZNF131P52739 623 aa11.31□□□□□ -0.6
FAM49A-202ENST00000406434 SMAD4Q13485 552 aaKnown RBP11.31□□□□□ -0.6
FAM49A-202ENST00000406434 BECN1Q14457 450 aa11.31□□□□□ -0.6
FAM49A-202ENST00000406434 HSP90AA2PQ14568 343 aaPredicted RBP11.31□□□□□ -0.6
FAM49A-202ENST00000406434 NOLC1Q14978 699 aaKnown RBP eCLIP11.31□□□□□ -0.6
FAM49A-202ENST00000406434 ZC2HC1CQ53FD0 456 aaPredicted RBP11.31□□□□□ -0.6
FAM49A-202ENST00000406434 ANKRD54Q6NXT1 300 aa11.31□□□□□ -0.6
FAM49A-202ENST00000406434 MSLNLQ96KJ4 702 aa11.31□□□□□ -0.6
FAM49A-202ENST00000406434 B3GALT6Q96L58 329 aa11.31□□□□□ -0.6
FAM49A-202ENST00000406434 GPR62Q9BZJ7 368 aa11.31□□□□□ -0.6
FAM49A-202ENST00000406434 TOPORSQ9NS56 1045 aaPredicted RBP11.31□□□□□ -0.6
FAM49A-202ENST00000406434 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.31□□□□□ -0.6
FAM49A-202ENST00000406434 STK39Q9UEW8 545 aa11.31□□□□□ -0.6
FAM49A-202ENST00000406434 ADAM28Q9UKQ2 775 aa11.31□□□□□ -0.6
FAM49A-202ENST00000406434 HCFC2Q9Y5Z7 792 aa11.31□□□□□ -0.6
FAM49A-202ENST00000406434 MORC2Q9Y6X9 1032 aaPredicted RBP11.31□□□□□ -0.6
FAM49A-202ENST00000406434 SMIM28A0A1B0GU29 152 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 URODP06132 367 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 CNPP09543 421 aaKnown RBP11.3□□□□□ -0.6
FAM49A-202ENST00000406434 MYBP10242 640 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 PROZP22891 400 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 COASYQ13057 564 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 PTPN14Q15678 1187 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 HERC4Q5GLZ8 1057 aaPredicted RBP11.3□□□□□ -0.6
FAM49A-202ENST00000406434 ATL3Q6DD88 541 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 FUT10Q6P4F1 479 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 ZPBP2Q6X784 338 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 SFR1Q86XK3 245 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 CEP57Q86XR8 500 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 GPIHBP1Q8IV16 184 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 KCNG4Q8TDN1 519 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 CASP10Q92851 521 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 DHX58Q96C10 678 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 KLHL5Q96PQ7 755 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 HERC2P3Q9BVR0 1158 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 MRPL44Q9H9J2 332 aaKnown RBP11.3□□□□□ -0.6
FAM49A-202ENST00000406434 SLC24A3Q9HC58 644 aa11.3□□□□□ -0.6
FAM49A-202ENST00000406434 PCDHA7Q9UN72 937 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms