RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 TAF2Q6P1X5 1199 aa22.75■■□□□ 1.23
TPM1-208ENST00000404484 NME8Q8N427 588 aa22.75■■□□□ 1.23
TPM1-208ENST00000404484 PLEKHO2Q8TD55 490 aa22.75■■□□□ 1.23
TPM1-208ENST00000404484 ZNF668Q96K58 619 aaPredicted RBP22.75■■□□□ 1.23
TPM1-208ENST00000404484 HAPLN2Q9GZV7 340 aa22.75■■□□□ 1.23
TPM1-208ENST00000404484 FAM49AQ9H0Q0 323 aaPredicted RBP22.75■■□□□ 1.23
TPM1-208ENST00000404484 MINDY3Q9H8M7 445 aa22.75■■□□□ 1.23
TPM1-208ENST00000404484 NLRC4Q9NPP4 1024 aa22.75■■□□□ 1.23
TPM1-208ENST00000404484 HDAC6Q9UBN7 1215 aa22.75■■□□□ 1.23
TPM1-208ENST00000404484 USP20Q9Y2K6 914 aa22.75■■□□□ 1.23
TPM1-208ENST00000404484 GOLGA6L9A6NEM1 432 aa22.74■■□□□ 1.23
TPM1-208ENST00000404484 LRRC53A6NM62 1247 aa22.74■■□□□ 1.23
TPM1-208ENST00000404484 ERLIN2O94905 339 aa22.74■■□□□ 1.23
TPM1-208ENST00000404484 TIMP1P01033 207 aa22.74■■□□□ 1.23
TPM1-208ENST00000404484 RPLP2P05387 115 aaKnown RBP22.74■■□□□ 1.23
TPM1-208ENST00000404484 ACOT2P49753 483 aa22.74■■□□□ 1.23
TPM1-208ENST00000404484 CLDN10P78369 228 aa22.74■■□□□ 1.23
TPM1-208ENST00000404484 SURF1Q15526 300 aa22.74■■□□□ 1.23
TPM1-208ENST00000404484 KYAT1Q16773 422 aa22.74■■□□□ 1.23
TPM1-208ENST00000404484 SFMBT2Q5VUG0 894 aa22.74■■□□□ 1.23
TPM1-208ENST00000404484 CCDC170Q8IYT3 715 aa22.74■■□□□ 1.23
TPM1-208ENST00000404484 EHBP1Q8NDI1 1231 aa22.74■■□□□ 1.23
TPM1-208ENST00000404484 SPAG5Q96R06 1193 aa22.74■■□□□ 1.23
TPM1-208ENST00000404484 UBE2OQ9C0C9 1292 aaKnown RBP22.74■■□□□ 1.23
TPM1-208ENST00000404484 PTPRHQ9HD43 1115 aa22.74■■□□□ 1.23
TPM1-208ENST00000404484 DLATP10515 647 aaKnown RBP22.73■■□□□ 1.23
TPM1-208ENST00000404484 HARSP12081 509 aaKnown RBP22.73■■□□□ 1.23
TPM1-208ENST00000404484 ACTN1P12814 892 aa22.73■■□□□ 1.23
TPM1-208ENST00000404484 CYLC1P35663 651 aaPredicted RBP22.73■■□□□ 1.23
TPM1-208ENST00000404484 NCBP1Q09161 790 aaKnown RBP22.73■■□□□ 1.23
TPM1-208ENST00000404484 DPY19L2P1Q6NXN4 242 aa22.73■■□□□ 1.23
TPM1-208ENST00000404484 WDR59Q6PJI9 974 aa22.73■■□□□ 1.23
TPM1-208ENST00000404484 CRELD2Q6UXH1 353 aaPredicted RBP22.73■■□□□ 1.23
TPM1-208ENST00000404484 APBB1IPQ7Z5R6 666 aaPredicted RBP22.73■■□□□ 1.23
TPM1-208ENST00000404484 BRSK2Q8IWQ3 736 aa22.73■■□□□ 1.23
TPM1-208ENST00000404484 TMEM117Q9H0C3 514 aa22.73■■□□□ 1.23
TPM1-208ENST00000404484 SIX2Q9NPC8 291 aa22.73■■□□□ 1.23
TPM1-208ENST00000404484 APEX2Q9UBZ4 518 aa22.73■■□□□ 1.23
TPM1-208ENST00000404484 TTLL13PA6NNM8 815 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 ABLIM1O14639 778 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 CCDC175P0C221 793 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 AP3M2P53677 418 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 POU5F1Q01860 360 aaKnown RBP22.72■■□□□ 1.23
TPM1-208ENST00000404484 PTPN11Q06124 597 aaPredicted RBP22.72■■□□□ 1.23
TPM1-208ENST00000404484 AMHR2Q16671 573 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 EPC2Q52LR7 807 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 RAD9BQ6WBX8 426 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 ZBTB33Q86T24 672 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 SESTD1Q86VW0 696 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 PPP1R16BQ96T49 567 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 ADAMTS10Q9H324 1103 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 COQ4Q9Y3A0 265 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 TREHO43280 583 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 B4GALT5O43286 388 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 IPO7O95373 1038 aaKnown RBP22.72■■□□□ 1.23
TPM1-208ENST00000404484 MCF2P10911 925 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 KIZQ2M2Z5 673 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 RUFY4Q6ZNE9 571 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 PPP1R12CQ9BZL4 782 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 GTF2IRD1Q9UHL9 959 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 PPP2R2CQ9Y2T4 447 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 FHOD1Q9Y613 1164 aa22.72■■□□□ 1.23
TPM1-208ENST00000404484 FAM189A1O60320 539 aa22.71■■□□□ 1.23
TPM1-208ENST00000404484 GPR32O75388 356 aa22.71■■□□□ 1.23
TPM1-208ENST00000404484 LAMA2P24043 3122 aaKnown RBP22.71■■□□□ 1.23
TPM1-208ENST00000404484 GDF6Q6KF10 455 aaPredicted RBP22.71■■□□□ 1.23
TPM1-208ENST00000404484 RSPH3Q86UC2 560 aa22.71■■□□□ 1.23
TPM1-208ENST00000404484 FBXL13Q8NEE6 735 aa22.71■■□□□ 1.23
TPM1-208ENST00000404484 DNAJB3Q8WWF6 145 aa22.71■■□□□ 1.23
TPM1-208ENST00000404484 CHP1Q99653 195 aa22.71■■□□□ 1.23
TPM1-208ENST00000404484 CGRRF1Q99675 332 aa22.71■■□□□ 1.23
TPM1-208ENST00000404484 ADPGKQ9BRR6 497 aa22.71■■□□□ 1.23
TPM1-208ENST00000404484 CDT1Q9H211 546 aa22.71■■□□□ 1.23
TPM1-208ENST00000404484 AIPL1Q9NZN9 384 aa22.71■■□□□ 1.23
TPM1-208ENST00000404484 EPN1Q9Y6I3 576 aaPredicted RBP22.71■■□□□ 1.23
TPM1-208ENST00000404484 UMODL1Q5DID0 1318 aa22.7■■□□□ 1.22
TPM1-208ENST00000404484 SERPING1P05155 500 aa22.7■■□□□ 1.22
TPM1-208ENST00000404484 IQCF3P0C7M6 154 aa22.7■■□□□ 1.22
TPM1-208ENST00000404484 TNNI1P19237 187 aa22.7■■□□□ 1.22
TPM1-208ENST00000404484 CYP2C18P33260 490 aa22.7■■□□□ 1.22
TPM1-208ENST00000404484 RAPGEF1Q13905 1077 aa22.7■■□□□ 1.22
TPM1-208ENST00000404484 HIC1Q14526 733 aa22.7■■□□□ 1.22
TPM1-208ENST00000404484 ASIC2Q16515 512 aa22.7■■□□□ 1.22
TPM1-208ENST00000404484 TOGARAM2Q6ZUX3 1019 aa22.7■■□□□ 1.22
TPM1-208ENST00000404484 LMO3Q8TAP4 145 aa22.7■■□□□ 1.22
TPM1-208ENST00000404484 PPP1R13BQ96KQ4 1090 aa22.7■■□□□ 1.22
TPM1-208ENST00000404484 FAM81BQ96LP2 452 aa22.7■■□□□ 1.22
TPM1-208ENST00000404484 HIPK3Q9H422 1215 aa22.7■■□□□ 1.22
TPM1-208ENST00000404484 TRMT1Q9NXH9 659 aaKnown RBP22.7■■□□□ 1.22
TPM1-208ENST00000404484 CPSF3Q9UKF6 684 aaKnown RBP22.7■■□□□ 1.22
TPM1-208ENST00000404484 KIF2AO00139 706 aaPredicted RBP22.69■■□□□ 1.22
TPM1-208ENST00000404484 TULP1O00294 542 aaPredicted RBP22.69■■□□□ 1.22
TPM1-208ENST00000404484 TSPAN1O60635 241 aa22.69■■□□□ 1.22
TPM1-208ENST00000404484 NDUFA10O95299 355 aa22.69■■□□□ 1.22
TPM1-208ENST00000404484 DARSP14868 501 aaKnown RBP22.69■■□□□ 1.22
TPM1-208ENST00000404484 APBA1Q02410 837 aa22.69■■□□□ 1.22
TPM1-208ENST00000404484 MTF1Q14872 753 aa22.69■■□□□ 1.22
TPM1-208ENST00000404484 PTGISQ16647 500 aa22.69■■□□□ 1.22
TPM1-208ENST00000404484 IQCEQ6IPM2 695 aa22.69■■□□□ 1.22
TPM1-208ENST00000404484 MFSD5Q6N075 450 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms