RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 VRK1Q99986 396 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 TCF25Q9BQ70 676 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 RUVBL1Q9Y265 456 aaKnown RBP6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 LRRIQ1Q96JM4 1722 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 RAPGEF6Q8TEU7 1601 aa6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 PCF11O94913 1555 aaKnown RBP6.35□□□□□ -1.39
HMGB3P19-201ENST00000403971 ATRNL1Q5VV63 1379 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 CFAP43Q8NDM7 1665 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 NPEPPSL1A6NEC2 478 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 A6NNZ2 444 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 SGTAO43765 313 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 GPR32O75388 356 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 DDCP20711 480 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 GNALP38405 381 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 MAP2K6P52564 334 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 TBX4P57082 545 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 ZNF280AP59817 542 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 ATP8B2P98198 1209 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 MRPL49Q13405 166 aaKnown RBP6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 MTM1Q13496 603 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 KHDC1Q4VXA5 237 aaKnown RBP6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 GJC2Q5T442 439 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 ANKS6Q68DC2 871 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 PPP4R3AQ6IN85 833 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 TCTN3Q6NUS6 607 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 FAM111BQ6SJ93 734 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 OVCH2Q7RTZ1 564 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 ZNF572Q7Z3I7 529 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 IFI44Q8TCB0 444 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 RGMAQ96B86 450 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 ARL8AQ96BM9 186 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 C1GALT1C1Q96EU7 318 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 MRGPRX4Q96LA9 322 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 CGRRF1Q99675 332 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 KCNH6Q9H252 994 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 EPC1Q9H2F5 836 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 HECW1Q76N89 1606 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 ABCA8O94911 1581 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 ERCC6L2Q5T890 1561 aa6.34□□□□□ -1.39
HMGB3P19-201ENST00000403971 KIF3BO15066 747 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 ERC2O15083 957 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 GPR42O15529 346 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 HOXA3O43365 443 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 FOXS1O43638 330 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 PRC1O43663 620 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 UBXN7O94888 489 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 PLATP00750 562 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 FTLP02792 175 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 INHBBP09529 407 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 ALOX15P16050 662 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 ALDH1A3P47895 512 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 GALEQ14376 348 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 GRM7Q14831 915 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 LLGL1Q15334 1064 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 AFMIDQ63HM1 303 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 SLC4A10Q6U841 1118 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 TTC7BQ86TV6 843 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 DGKHQ86XP1 1220 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 COL23A1Q86Y22 540 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 XYLT1Q86Y38 959 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 DENND1CQ8IV53 801 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 SLC35B2Q8TB61 432 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 CYFIP2Q96F07 1278 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 CCDC136Q96JN2 1154 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 ZNF512Q96ME7 567 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 MYOCQ99972 504 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 LRFN3Q9BTN0 628 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 GOLGA2P5Q9HBQ8 144 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 TMEM140Q9NV12 185 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 PLA2G3Q9NZ20 509 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 PCDHA3Q9Y5H8 950 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 NR2E3Q9Y5X4 410 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 PTPRGP23470 1445 aa6.33□□□□□ -1.4
HMGB3P19-201ENST00000403971 FRMPD2Q68DX3 1309 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 ARHGEF11O15085 1522 aa6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 H3BML4 177 aa6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 RAP2AP10114 183 aa6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 MSX2P35548 267 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 TLE1Q04724 770 aa6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 FOXL1Q12952 345 aa6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 GBX1Q14549 363 aa6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 KRTAP19-4Q3LI73 84 aa6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 ZFYVE27Q5T4F4 411 aa6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 PDZD4Q76G19 769 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 KRTAP19-1Q8IUB9 90 aa6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 FUKQ8N0W3 1084 aa6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 DCBLD1Q8N8Z6 715 aa6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 SAMD11Q96NU1 681 aa6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 NELFAQ9H3P2 528 aa6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 C1orf112Q9NSG2 853 aa6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 GEMIN8Q9NWZ8 242 aaKnown RBP6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 ZFR2Q9UPR6 939 aaKnown RBP6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 SH3BP1Q9Y3L3 701 aa6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 CCDC18Q5T9S5 1454 aa6.32□□□□□ -1.4
HMGB3P19-201ENST00000403971 TIAM1Q13009 1591 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 UHRF1BP1LA0JNW5 1464 aa6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 A0A0G2JLL6 359 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P19-201ENST00000403971 B3GALT2O43825 422 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms