RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 CD1AP06126 327 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 GYPEP15421 78 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 PHKG2P15735 406 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 CRHR1P34998 444 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 PIK3CBP42338 1070 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 WNT3AP56704 352 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 OS9Q13438 667 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 ZMAT1Q5H9K5 638 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 FAM26FQ5R3K3 315 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 THEMIS2Q5TEJ8 643 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 AFMIDQ63HM1 303 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 ANKS6Q68DC2 871 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 ADGRE4PQ86SQ3 457 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 SRLQ86TD4 932 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 MORC1Q86VD1 984 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 XYLT1Q86Y38 959 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 CERS3Q8IU89 383 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 EXOC8Q8IYI6 725 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 LINC01356Q8N9X3 169 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 SYT8Q8NBV8 401 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 SLC35B2Q8TB61 432 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 SLC38A3Q99624 504 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 ELAC2Q9BQ52 826 aaKnown RBP4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 SLC6A15Q9H2J7 730 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 C12orf65Q9H3J6 166 aaKnown RBP4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 AGO3Q9H9G7 860 aaKnown RBP4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 TMEM140Q9NV12 185 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 PNPOQ9NVS9 261 aa4.87□□□□□ -1.63
HMGB1P17-201ENST00000403495 TCRBV7S2A1N4TA0A589 114 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 NT5C1B-RDH14C9J2C7 533 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 F2RL2O00254 374 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 CNOT4O95628 575 aaKnown RBP4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 TSPAN15O95858 294 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 JUNP05412 331 aaKnown RBP4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 ALOX15P16050 662 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 NPR1P16066 1061 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 SMARCA1P28370 1054 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 RAP1GAPP47736 663 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 PRIM2P49643 509 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 ALDH5A1P51649 535 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 RAP2BP61225 183 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 APBA1Q02410 837 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 RIN1Q13671 783 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 FGL2Q14314 439 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 RAB39AQ14964 217 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 CIAPIN1Q6FI81 312 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 UBE3BQ7Z3V4 1068 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 CMTM4Q8IZR5 234 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 SPICE1Q8N0Z3 855 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 SAMD3Q8N6K7 520 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 MORC4Q8TE76 937 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 TMEM176AQ96HP8 235 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 LRRC37BQ96QE4 947 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 PPP1R16BQ96T49 567 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 KCNH6Q9H252 994 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 EPC1Q9H2F5 836 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 RSAD1Q9HA92 442 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 IL23AQ9NPF7 189 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 SLC23A1Q9UHI7 598 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 FEZ2Q9UHY8 353 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 COMMD10Q9Y6G5 202 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 ATRNL1Q5VV63 1379 aa4.86□□□□□ -1.63
HMGB1P17-201ENST00000403495 C9orf118A6NHY6 69 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 KIAA0391O15091 583 aaKnown RBP4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 SLC16A6O15403 523 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 SLC26A4O43511 780 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 MGEA5O60502 916 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 HDCP19113 662 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 PRDX5P30044 214 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 SLC7A1P30825 629 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 CACNB3P54284 484 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 CTXN1P60606 82 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 EXOSC9Q06265 439 aaKnown RBP4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 ZNF568Q3ZCX4 644 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 NT5DC1Q5TFE4 455 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 ZNF572Q7Z3I7 529 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 LIX1LQ8IVB5 337 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 GPR135Q8IZ08 494 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 PCSK9Q8NBP7 692 aaKnown RBP4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 SHCBP1Q8NEM2 672 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 IL31RAQ8NI17 732 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 TNPO1Q92973 898 aaKnown RBP4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 CYFIP2Q96F07 1278 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 P2RX7Q99572 595 aaKnown RBP4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 ENKD1Q9H0I2 346 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 ZNF700Q9H0M5 742 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 CPNE7Q9UBL6 633 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 PUF60Q9UHX1 559 aaKnown RBP4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 TPCN1Q9ULQ1 816 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 SLC45A2Q9UMX9 530 aa4.85□□□□□ -1.63
HMGB1P17-201ENST00000403495 LOC102724159A0A0B4J2E5 919 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 A0A1W2PPL8 197 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 A0A1W2PRX2 142 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 RHPN2P1A8MT19 583 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 CXorf49A8MYA2 514 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 GRM6O15303 877 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 PHGDHO43175 533 aaKnown RBP4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 MTSS1O43312 755 aa4.84□□□□□ -1.63
HMGB1P17-201ENST00000403495 NOBOXO60393 691 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms