RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 CCZ1BP86790 482 aa8.81□□□□□ -1
CHD8-201ENST00000399982 CCZ1P86791 482 aaPredicted RBP8.81□□□□□ -1
CHD8-201ENST00000399982 MTHFSDQ2M296 383 aaKnown RBP8.81□□□□□ -1
CHD8-201ENST00000399982 CYFIP1Q7L576 1253 aa8.81□□□□□ -1
CHD8-201ENST00000399982 TADA1Q96BN2 335 aa8.81□□□□□ -1
CHD8-201ENST00000399982 COPRSQ9NQ92 184 aa8.81□□□□□ -1
CHD8-201ENST00000399982 SPATA2Q9UM82 520 aa8.81□□□□□ -1
CHD8-201ENST00000399982 SNX24Q9Y343 169 aa8.81□□□□□ -1
CHD8-201ENST00000399982 ASXL2Q76L83 1435 aa8.81□□□□□ -1
CHD8-201ENST00000399982 MAP3K15Q6ZN16 1313 aa8.81□□□□□ -1
CHD8-201ENST00000399982 TECP42680 631 aa8.81□□□□□ -1
CHD8-201ENST00000399982 PHKA1P46020 1223 aa8.81□□□□□ -1
CHD8-201ENST00000399982 CLK1P49759 484 aaKnown RBP8.81□□□□□ -1
CHD8-201ENST00000399982 RBBP4Q09028 425 aa8.81□□□□□ -1
CHD8-201ENST00000399982 GSTA3Q16772 222 aa8.81□□□□□ -1
CHD8-201ENST00000399982 USP39Q53GS9 565 aaKnown RBP8.81□□□□□ -1
CHD8-201ENST00000399982 FAM160B1Q5W0V3 765 aa8.81□□□□□ -1
CHD8-201ENST00000399982 LRRC31Q6UY01 552 aa8.81□□□□□ -1
CHD8-201ENST00000399982 UNC13DQ70J99 1090 aa8.81□□□□□ -1
CHD8-201ENST00000399982 LRRC39Q96DD0 335 aa8.81□□□□□ -1
CHD8-201ENST00000399982 TRABDQ9H4I3 376 aa8.81□□□□□ -1
CHD8-201ENST00000399982 AURKCQ9UQB9 309 aa8.81□□□□□ -1
CHD8-201ENST00000399982 URB2Q14146 1524 aaKnown RBP8.81□□□□□ -1
CHD8-201ENST00000399982 ACEP12821 1306 aa8.81□□□□□ -1
CHD8-201ENST00000399982 PRPF3O43395 683 aaKnown RBP8.81□□□□□ -1
CHD8-201ENST00000399982 TSPAN9O75954 239 aa8.81□□□□□ -1
CHD8-201ENST00000399982 TNFAIP8O95379 198 aa8.81□□□□□ -1
CHD8-201ENST00000399982 TTLL1O95922 423 aa8.81□□□□□ -1
CHD8-201ENST00000399982 CCDC144BQ3MJ40 725 aa8.81□□□□□ -1
CHD8-201ENST00000399982 ARL13BQ3SXY8 428 aa8.81□□□□□ -1
CHD8-201ENST00000399982 IKBIPQ70UQ0 350 aa8.81□□□□□ -1
CHD8-201ENST00000399982 KRT73Q86Y46 540 aa8.81□□□□□ -1
CHD8-201ENST00000399982 KRT78Q8N1N4 520 aa8.81□□□□□ -1
CHD8-201ENST00000399982 POMGNT2Q8NAT1 580 aa8.81□□□□□ -1
CHD8-201ENST00000399982 AP1M1Q9BXS5 423 aa8.81□□□□□ -1
CHD8-201ENST00000399982 AS3MTQ9HBK9 375 aa8.81□□□□□ -1
CHD8-201ENST00000399982 KIAA1586Q9HCI6 787 aa8.81□□□□□ -1
CHD8-201ENST00000399982 GINM1Q9NU53 330 aa8.81□□□□□ -1
CHD8-201ENST00000399982 CORO1CQ9ULV4 474 aaPredicted RBP8.81□□□□□ -1
CHD8-201ENST00000399982 CIAO1O76071 339 aa8.81□□□□□ -1
CHD8-201ENST00000399982 ALAS1P13196 640 aa8.81□□□□□ -1
CHD8-201ENST00000399982 ALDH6A1Q02252 535 aaKnown RBP8.81□□□□□ -1
CHD8-201ENST00000399982 ZMYM1Q5SVZ6 1142 aa8.81□□□□□ -1
CHD8-201ENST00000399982 ATAD3BQ5T9A4 648 aa8.81□□□□□ -1
CHD8-201ENST00000399982 MEI1Q5TIA1 1274 aa8.81□□□□□ -1
CHD8-201ENST00000399982 EIF1ADQ8N9N8 165 aaKnown RBP8.81□□□□□ -1
CHD8-201ENST00000399982 SPATA5Q8NB90 893 aa8.81□□□□□ -1
CHD8-201ENST00000399982 ERP27Q96DN0 273 aa8.81□□□□□ -1
CHD8-201ENST00000399982 OMA1Q96E52 524 aa8.81□□□□□ -1
CHD8-201ENST00000399982 FUT8Q9BYC5 575 aa8.81□□□□□ -1
CHD8-201ENST00000399982 RMI1Q9H9A7 625 aa8.81□□□□□ -1
CHD8-201ENST00000399982 FAM32AQ9Y421 112 aaKnown RBP8.81□□□□□ -1
CHD8-201ENST00000399982 PDE8AO60658 829 aa8.81□□□□□ -1
CHD8-201ENST00000399982 TRIM49P0CI25 452 aa8.81□□□□□ -1
CHD8-201ENST00000399982 TRIM49CP0CI26 452 aa8.81□□□□□ -1
CHD8-201ENST00000399982 CSTF3Q12996 717 aaKnown RBP8.81□□□□□ -1
CHD8-201ENST00000399982 ARHGEF6Q15052 776 aa8.81□□□□□ -1
CHD8-201ENST00000399982 C18orf25Q96B23 403 aaPredicted RBP8.81□□□□□ -1
CHD8-201ENST00000399982 ARMT1Q9H993 441 aa8.81□□□□□ -1
CHD8-201ENST00000399982 IARS2Q9NSE4 1012 aaKnown RBP8.81□□□□□ -1
CHD8-201ENST00000399982 PCDHGA4Q9Y5G9 962 aa8.81□□□□□ -1
CHD8-201ENST00000399982 PCDHGA3Q9Y5H0 932 aa8.81□□□□□ -1
CHD8-201ENST00000399982 PNMA6EA0A0J9YXQ4 647 aa8.81□□□□□ -1
CHD8-201ENST00000399982 A0A1W2PQJ5 194 aa8.81□□□□□ -1
CHD8-201ENST00000399982 CALB2P22676 271 aa8.81□□□□□ -1
CHD8-201ENST00000399982 PTH1RQ03431 593 aa8.81□□□□□ -1
CHD8-201ENST00000399982 KCNB1Q14721 858 aa8.81□□□□□ -1
CHD8-201ENST00000399982 TAB1Q15750 504 aa8.81□□□□□ -1
CHD8-201ENST00000399982 GPATCH4Q5T3I0 446 aaKnown RBP8.81□□□□□ -1
CHD8-201ENST00000399982 TTC33Q6PID6 262 aaPredicted RBP8.81□□□□□ -1
CHD8-201ENST00000399982 ARMCX6Q7L4S7 300 aa8.81□□□□□ -1
CHD8-201ENST00000399982 DDX53Q86TM3 631 aaKnown RBP8.81□□□□□ -1
CHD8-201ENST00000399982 YAF2Q8IY57 180 aa8.81□□□□□ -1
CHD8-201ENST00000399982 ATL2Q8NHH9 583 aa8.81□□□□□ -1
CHD8-201ENST00000399982 MAGEC3Q8TD91 643 aa8.81□□□□□ -1
CHD8-201ENST00000399982 CHURC1Q8WUH1 139 aa8.81□□□□□ -1
CHD8-201ENST00000399982 HES6Q96HZ4 224 aa8.81□□□□□ -1
CHD8-201ENST00000399982 PRMT1Q99873 361 aaKnown RBP8.81□□□□□ -1
CHD8-201ENST00000399982 TEKT3Q9BXF9 490 aa8.81□□□□□ -1
CHD8-201ENST00000399982 A1CFQ9NQ94 594 aaKnown RBP8.81□□□□□ -1
CHD8-201ENST00000399982 ADAM30Q9UKF2 790 aa8.81□□□□□ -1
CHD8-201ENST00000399982 TMCO1Q9UM00 188 aa8.81□□□□□ -1
CHD8-201ENST00000399982 A0A1B0GTH6 734 aa8.8□□□□□ -1
CHD8-201ENST00000399982 PRPSAP2O60256 369 aa8.8□□□□□ -1
CHD8-201ENST00000399982 DHX40Q8IX18 779 aaKnown RBP8.8□□□□□ -1
CHD8-201ENST00000399982 CHAMP1Q96JM3 812 aa8.8□□□□□ -1
CHD8-201ENST00000399982 CLIC6Q96NY7 704 aa8.8□□□□□ -1
CHD8-201ENST00000399982 KLHL4Q9C0H6 718 aa8.8□□□□□ -1
CHD8-201ENST00000399982 GPBP1L1Q9HC44 474 aaPredicted RBP8.8□□□□□ -1
CHD8-201ENST00000399982 STON1Q9Y6Q2 735 aa8.8□□□□□ -1
CHD8-201ENST00000399982 ZNF521Q96K83 1311 aa8.8□□□□□ -1
CHD8-201ENST00000399982 PCDH11YQ9BZA8 1340 aa8.8□□□□□ -1
CHD8-201ENST00000399982 TRIM24O15164 1050 aa8.8□□□□□ -1
CHD8-201ENST00000399982 FOXO3O43524 673 aa8.8□□□□□ -1
CHD8-201ENST00000399982 PDE9AO76083 593 aa8.8□□□□□ -1
CHD8-201ENST00000399982 PSMC3P17980 439 aa8.8□□□□□ -1
CHD8-201ENST00000399982 RCN1Q15293 331 aa8.8□□□□□ -1
CHD8-201ENST00000399982 KLHL12Q53G59 568 aa8.8□□□□□ -1
CHD8-201ENST00000399982 SIX5Q8N196 739 aa8.8□□□□□ -1
CHD8-201ENST00000399982 AFG1LQ8WV93 481 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms