RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 EZH2Q15910 746 aaKnown RBP9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 ZCCHC8Q6NZY4 707 aaKnown RBP9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 TBATAQ96M53 351 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 RIBC2Q9H4K1 309 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 GPC6Q9Y625 555 aaPredicted RBP9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 TIMM44O43615 452 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 ITIH1P19827 911 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 CHMLP26374 656 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 IRAK1BP1Q5VVH5 260 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 MZT2AQ6P582 158 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 PM20D2Q8IYS1 436 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 SIX5Q8N196 739 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 TMX3Q96JJ7 454 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 VTA1Q9NP79 307 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 MAPRE3Q9UPY8 281 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 TRIM43BA6NCK2 446 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 MAFKO60675 156 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 CXorf56Q9H5V9 222 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 CCSER2Q9H7U1 834 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 PGK2P07205 417 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 PTPN6P29350 595 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 INTS11Q5TA45 600 aaKnown RBP9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 SLC9C2Q5TAH2 1124 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 ZFRQ96KR1 1074 aaKnown RBP9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 CLEC4AQ9UMR7 237 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 RASA4BC9J798 803 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 E9PBE3 544 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 RASA4O43374 803 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 BCL10O95999 233 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 AGGF1Q8N302 714 aaeCLIP9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 ACAP3Q96P50 834 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 FAM207AQ9NSI2 230 aaPredicted RBP9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 TBK1Q9UHD2 729 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 KDRP35968 1356 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 IBTKQ9P2D0 1353 aaPredicted RBP9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 B2RBV5 119 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 KLHL2O95198 593 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 ATXN8OSP0DMR3 200 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 ALFQ53S48 1182 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 SNAPC5O75971 98 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 TTC30BQ8N4P2 665 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 KCNJ18B7U540 433 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 RAD51Q06609 339 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 KCNJ12Q14500 433 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 ERMARDQ5T6L9 678 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 TRIM65Q6PJ69 517 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 COMMD2Q86X83 199 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 C10orf53Q8N6V4 93 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 SNRNP27Q8WVK2 155 aaKnown RBP9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 EYA3Q99504 573 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 CCDC86Q9H6F5 360 aaKnown RBP9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 LRRC4Q9HBW1 653 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 hCG_1642624A0A1W2PR95 340 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 SGSM2O43147 1006 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 DR1Q01658 176 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 MAPK11Q15759 364 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 FAM76BQ5HYJ3 339 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 ZNF467Q7Z7K2 595 aaPredicted RBP9□□□□□ -0.97
CACNA1C-220ENST00000399655 PIH1D3Q9NQM4 214 aaKnown RBP9□□□□□ -0.97
CACNA1C-220ENST00000399655 RPS6KB2Q9UBS0 482 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 TPD52L2O43399 206 aaKnown RBP9□□□□□ -0.97
CACNA1C-220ENST00000399655 SUPT7LO94864 414 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 CDH6P55285 790 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 EIF3EP60228 445 aaKnown RBP9□□□□□ -0.97
CACNA1C-220ENST00000399655 RPS7P62081 194 aaKnown RBP9□□□□□ -0.97
CACNA1C-220ENST00000399655 IL18R1Q13478 541 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 SULT6B1Q6IMI4 303 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 TM9SF1O15321 606 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 RGS1Q08116 209 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 VMP1Q96GC9 406 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 DCUN1D1Q96GG9 259 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 SERPINB12Q96P63 405 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 RABL6Q3YEC7 729 aaPredicted RBP9□□□□□ -0.97
CACNA1C-220ENST00000399655 WDR93Q6P2C0 686 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 ZNF438Q7Z4V0 828 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 C17orf80Q9BSJ5 609 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 CYP39A1Q9NYL5 469 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 MEFVO15553 781 aaPredicted RBP9□□□□□ -0.97
CACNA1C-220ENST00000399655 CYP7A1P22680 504 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 CSNK2BP67870 215 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 ZNF57Q68EA5 555 aaPredicted RBP9□□□□□ -0.97
CACNA1C-220ENST00000399655 RBBP8NLQ8NC74 664 aaPredicted RBP9□□□□□ -0.97
CACNA1C-220ENST00000399655 UNC45AQ9H3U1 944 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 OR14I1A6ND48 311 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 C2orf71A6NGG8 1288 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 PCP4L1A6NKN8 68 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 TRIM38O00635 465 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 CTIFO43310 598 aaKnown RBP9□□□□□ -0.97
CACNA1C-220ENST00000399655 CLTBP09497 229 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 PTGS2P35354 604 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 DNAJC24Q6P3W2 148 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 CCDC81Q6ZN84 652 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 REXO1Q8N1G1 1221 aaKnown RBP9□□□□□ -0.97
CACNA1C-220ENST00000399655 C5orf51A6NDU8 294 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 ARL5CA6NH57 179 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 KLHL41O60662 606 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 ECHS1P30084 290 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 PGM1P36871 562 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 BCAR1P56945 870 aa9□□□□□ -0.97
CACNA1C-220ENST00000399655 ATP6V1C2Q8NEY4 427 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms