RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 ADGRA2Q96PE1 1338 aa13.17□□□□□ -0.3
CACNA1C-209ENST00000399603 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 TAF4O00268 1085 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 P4HA2O15460 535 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 BCAP31P51572 246 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 UTS2BQ765I0 119 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 HIC2Q96JB3 615 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 ACCSQ96QU6 501 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 E2F8A0AVK6 867 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 ATP9BO43861 1147 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 ALDH1B1P30837 517 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 GPR1P46091 355 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 ZBED8Q8IZ13 594 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 EXD1Q8NHP7 514 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 UBE2OQ9C0C9 1292 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 PPP6R2O75170 966 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 PARNO95453 639 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 FGAP02671 866 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 HSD3B2P26439 372 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 SLFN12LQ6IEE8 588 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 GRAMD1CQ8IYS0 662 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 CYFIP2Q96F07 1278 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 PRMT1Q99873 361 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 MRPL1Q9BYD6 325 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 NPHS2Q9NP85 383 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 PDZK1P1A8MUH7 402 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 ATP6V1C1P21283 382 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 RBBP4Q09028 425 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 GRSF1Q12849 480 aaKnown RBP eCLIP13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 MAPK11Q15759 364 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 SGO1Q5FBB7 561 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 DGKKQ5KSL6 1271 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 ANKRD40Q6AI12 368 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 POLR1BQ9H9Y6 1135 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 ANAPC7Q9UJX3 599 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 TRIM24O15164 1050 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 PDE8BO95263 885 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 HPCAP84074 193 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 PDIA2Q13087 525 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 DNAJC3Q13217 504 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 BRINP3Q76B58 766 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 IZUMO1Q8IYV9 350 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 DDI1Q8WTU0 396 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 SLC7A3Q8WY07 619 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 PIGBQ92521 554 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 VIPAS39Q9H9C1 493 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 MAFFQ9ULX9 164 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 PCDHA7Q9UN72 937 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 MAPKAPK2P49137 400 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 ABCE1P61221 599 aaKnown RBP13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 LLGL2Q6P1M3 1020 aa13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 ZNF589Q86UQ0 364 aaPredicted RBP13.16□□□□□ -0.3
CACNA1C-209ENST00000399603 MLNP12872 115 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 AP1S2P56377 157 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 TCP11X1B4DZS4 312 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 PODXLO00592 558 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 PRKAB2O43741 272 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 PDE9AO76083 593 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 SERPING1P05155 500 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 DYNLL1P63167 89 aaKnown RBP13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 AFG1LQ8WV93 481 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 SPON2Q9BUD6 331 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 BTBD18B2RXH4 712 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 PFKFB2O60825 505 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 NNMTP40261 264 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 NRG3P56975 720 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 RBM6P78332 1123 aaKnown RBP13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 GPS1Q13098 491 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 ZNF618Q5T7W0 954 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 C18orf25Q96B23 403 aaPredicted RBP13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 RMDN1Q96DB5 314 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 CUEDC2Q9H467 287 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 SERHL2Q9H4I8 314 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 ZNF304Q9HCX3 659 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 SERHLQ9NQF3 203 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 PDAP1Q13442 181 aaKnown RBP13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 SLC10A5Q5PT55 438 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 ARMC3Q5W041 872 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 FANCBQ8NB91 859 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 RNF25Q96BH1 459 aaPredicted RBP13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 RNFT2Q96EX2 444 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 ZNF577Q9BSK1 485 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 ROGDIQ9GZN7 287 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 TPST1O60507 370 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 PALMO75781 387 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 SEMA3DO95025 777 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 PRKCQQ04759 706 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 EEPD1Q7L9B9 569 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 SEC16BQ96JE7 1060 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 PCSK1NQ9UHG2 260 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 A0A1W2PRG6 482 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 MIER2Q8N344 545 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 FAM45AQ8TCE6 357 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 CNDP1Q96KN2 507 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 ZFATQ9P243 1243 aa13.15□□□□□ -0.3
CACNA1C-209ENST00000399603 DPYSL4O14531 572 aa13.14□□□□□ -0.31
CACNA1C-209ENST00000399603 USP1O94782 785 aa13.14□□□□□ -0.31
CACNA1C-209ENST00000399603 ALBP02768 609 aa13.14□□□□□ -0.31
CACNA1C-209ENST00000399603 ZNF57Q68EA5 555 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms