RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 NAGPAQ9UK23 515 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 GNEQ9Y223 722 aaKnown RBP16.34■□□□□ 0.21
COL25A1-201ENST00000399126 COQ4Q9Y3A0 265 aa16.34■□□□□ 0.21
COL25A1-201ENST00000399126 A0A087WZ62 844 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 TNPO2O14787 897 aaKnown RBP16.33■□□□□ 0.21
COL25A1-201ENST00000399126 PJA2O43164 708 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 SRGAP2O75044 1071 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 USP8P40818 1118 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 AMPD2Q01433 879 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 MBTD1Q05BQ5 628 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 PSMD6Q15008 389 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 ELF2Q15723 593 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 KIAA0753Q2KHM9 967 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 ERCC6LQ2NKX8 1250 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 TDRD10Q5VZ19 366 aaKnown RBP16.33■□□□□ 0.21
COL25A1-201ENST00000399126 EEF1DP3Q658K8 133 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 SLFN12LQ6IEE8 588 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 KRT222Q8N1A0 295 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 LINC01465Q8N7H1 131 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 OR5B17Q8NGF7 314 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 DHX38Q92620 1227 aaKnown RBP16.33■□□□□ 0.21
COL25A1-201ENST00000399126 FDXACB1Q9BRP7 624 aaPredicted RBP16.33■□□□□ 0.21
COL25A1-201ENST00000399126 ZFYVE28Q9HCC9 887 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 AKT3Q9Y243 479 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 CNTNAP2Q9UHC6 1331 aa16.33■□□□□ 0.21
COL25A1-201ENST00000399126 KIF3CO14782 793 aa16.33■□□□□ 0.2
COL25A1-201ENST00000399126 PMM2O15305 246 aa16.33■□□□□ 0.2
COL25A1-201ENST00000399126 HOXC6P09630 235 aa16.33■□□□□ 0.2
COL25A1-201ENST00000399126 HOXD8P13378 290 aaPredicted RBP16.33■□□□□ 0.2
COL25A1-201ENST00000399126 PTENP60484 403 aa16.33■□□□□ 0.2
COL25A1-201ENST00000399126 PPFIA1Q13136 1202 aa16.33■□□□□ 0.2
COL25A1-201ENST00000399126 DGKDQ16760 1214 aa16.33■□□□□ 0.2
COL25A1-201ENST00000399126 ZPBP2Q6X784 338 aa16.33■□□□□ 0.2
COL25A1-201ENST00000399126 C15orf39Q6ZRI6 1047 aa16.33■□□□□ 0.2
COL25A1-201ENST00000399126 HELQQ8TDG4 1101 aa16.33■□□□□ 0.2
COL25A1-201ENST00000399126 ERO1AQ96HE7 468 aa16.33■□□□□ 0.2
COL25A1-201ENST00000399126 FNBP1Q96RU3 617 aa16.33■□□□□ 0.2
COL25A1-201ENST00000399126 SYT11Q9BT88 431 aa16.33■□□□□ 0.2
COL25A1-201ENST00000399126 TSGA10Q9BZW7 698 aa16.33■□□□□ 0.2
COL25A1-201ENST00000399126 SETD4Q9NVD3 440 aa16.33■□□□□ 0.2
COL25A1-201ENST00000399126 BZW2Q9Y6E2 419 aaKnown RBP16.33■□□□□ 0.2
COL25A1-201ENST00000399126 TMCO5BA8MYB1 307 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 TOM1L1O75674 476 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 CALCAP01258 141 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 GPC3P51654 580 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 OSTNP61366 133 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 GRIK4Q16099 956 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 SPOPLQ6IQ16 392 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 ALKBH5Q6P6C2 394 aaKnown RBP16.32■□□□□ 0.2
COL25A1-201ENST00000399126 MTHFD1LQ6UB35 978 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 TLK2Q86UE8 772 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 JPH2Q9BR39 696 aaPredicted RBP16.32■□□□□ 0.2
COL25A1-201ENST00000399126 NENFQ9UMX5 172 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 CLDN10P78369 228 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 PRPF4BQ13523 1007 aaKnown RBP16.32■□□□□ 0.2
COL25A1-201ENST00000399126 U2AF1L4Q8WU68 220 aaKnown RBP16.32■□□□□ 0.2
COL25A1-201ENST00000399126 EPC1Q9H2F5 836 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 FZD8Q9H461 694 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 KIAA1586Q9HCI6 787 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 TAS2R14Q9NYV8 317 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 PUF60Q9UHX1 559 aaKnown RBP16.32■□□□□ 0.2
COL25A1-201ENST00000399126 VNN1O95497 513 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 C4BPAP04003 597 aaKnown RBP16.32■□□□□ 0.2
COL25A1-201ENST00000399126 BEX3Q00994 111 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 CAP1Q01518 475 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 TMEM62Q0P6H9 643 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 TMEM192Q8IY95 271 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 TMEM130Q8N3G9 435 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 MSL3Q8N5Y2 521 aaKnown RBP16.32■□□□□ 0.2
COL25A1-201ENST00000399126 KAT2BQ92831 832 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 FAM212AQ96EL1 285 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 CDC23Q9UJX2 597 aa16.32■□□□□ 0.2
COL25A1-201ENST00000399126 ACKR2O00590 384 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 BIRC3Q13489 604 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 TFDP1Q14186 410 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 HIC1Q14526 733 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 NAB2Q15742 525 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 ZACNQ401N2 412 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 THNSL1Q8IYQ7 743 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 MNS1Q8NEH6 495 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 SLC30A5Q8TAD4 765 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 C2orf40Q9H1Z8 148 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 SEPT11Q9NVA2 429 aaKnown RBP16.31■□□□□ 0.2
COL25A1-201ENST00000399126 ANK1P16157 1881 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 A6NJR5 290 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 CYP26A1O43174 497 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 NCK2O43639 380 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 TADA3O75528 432 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 KIF4AO95239 1232 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 SGPL1O95470 568 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 TBC1D8O95759 1140 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 GTF2H1P32780 548 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 NAP1L1P55209 391 aaKnown RBP16.31■□□□□ 0.2
COL25A1-201ENST00000399126 INHBEP58166 350 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 KIF22Q14807 665 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 ATF7IP2Q5U623 682 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 USP37Q86T82 979 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 LMBR1Q8WVP7 490 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 PTPRHQ9HD43 1115 aa16.31■□□□□ 0.2
COL25A1-201ENST00000399126 HLA-DRAP01903 254 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms