RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 TNNI1P19237 187 aa19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 OSBPP22059 807 aa19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 SOX10P56693 466 aa19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 RNASE9P60153 205 aaKnown RBP19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 MTMR3Q13615 1198 aa19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 LRIG3Q6UXM1 1119 aa19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 GADL1Q6ZQY3 521 aa19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 USP50Q70EL3 339 aaPredicted RBP19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 GSPT2Q8IYD1 628 aaKnown RBP19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 FAM76AQ8TAV0 307 aa19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 KAT5Q92993 513 aa19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 VCPIP1Q96JH7 1222 aa19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 POP1Q99575 1024 aaKnown RBP19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ZSWIM1Q9BR11 485 aa19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 FAM129AQ9BZQ8 928 aa19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ASCC2Q9H1I8 757 aaPredicted RBP19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 C2orf40Q9H1Z8 148 aa19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CALCOCO1Q9P1Z2 691 aa19.02■□□□□ 0.63
HLA-DQB1-204ENST00000399084 POLR2AP24928 1970 aaKnown RBP19.01■□□□□ 0.63
HLA-DQB1-204ENST00000399084 SIP14410 1827 aa19.01■□□□□ 0.63
HLA-DQB1-204ENST00000399084 GOLGA6CA6NDK9 693 aa19.01■□□□□ 0.63
HLA-DQB1-204ENST00000399084 LRRIQ4A6NIV6 560 aa19.01■□□□□ 0.63
HLA-DQB1-204ENST00000399084 GOLGA6DP0CG33 693 aa19.01■□□□□ 0.63
HLA-DQB1-204ENST00000399084 POU5F1Q01860 360 aaKnown RBP19.01■□□□□ 0.63
HLA-DQB1-204ENST00000399084 PRKG1Q13976 671 aa19.01■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CLEC16AQ2KHT3 1053 aa19.01■□□□□ 0.63
HLA-DQB1-204ENST00000399084 LEKR1Q6ZMV7 388 aa19.01■□□□□ 0.63
HLA-DQB1-204ENST00000399084 DNAAF5Q86Y56 855 aa19.01■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ASAP3Q8TDY4 903 aa19.01■□□□□ 0.63
HLA-DQB1-204ENST00000399084 TMEM143Q96AN5 459 aa19.01■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CGRRF1Q99675 332 aa19.01■□□□□ 0.63
HLA-DQB1-204ENST00000399084 MSTO1Q9BUK6 570 aa19.01■□□□□ 0.63
HLA-DQB1-204ENST00000399084 GOLGA6AQ9NYA3 693 aa19.01■□□□□ 0.63
HLA-DQB1-204ENST00000399084 LCMT1Q9UIC8 334 aa19.01■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CNTN6Q9UQ52 1028 aa19.01■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ADGRA2Q96PE1 1338 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 GRIN3BO60391 1043 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 DDNO94850 711 aaPredicted RBP19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 MMEP08473 750 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CHRNA3P32297 505 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 SLC1A1P43005 524 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 LMAN1P49257 510 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 SHCBP1Q8NEM2 672 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ZNF564Q8TBZ8 553 aaPredicted RBP19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CD101Q93033 1021 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 PCYT2Q99447 389 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 AP1M1Q9BXS5 423 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 RBAKQ9NYW8 714 aaPredicted RBP19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 RASAL2Q9UJF2 1139 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 PCDHA3Q9Y5H8 950 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 DNAJC25-GNG10A0A024R161 153 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 PODXLO00592 558 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ERLIN2O94905 339 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 HLA-DRAP01903 254 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 IVLP07476 585 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ACTN2P35609 894 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 TCF7P36402 384 aaPredicted RBP19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 PEX5P50542 639 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 SEL1L2Q5TEA6 688 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 EMC10Q5UCC4 262 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CRELD2Q6UXH1 353 aaPredicted RBP19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 MAIP1Q8WWC4 291 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ZNF516Q92618 1163 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 TATDN2Q93075 761 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 GDAP1L1Q96MZ0 367 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 MRPL4Q9BYD3 311 aaKnown RBP19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 SPON1Q9HCB6 807 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 MTUS1Q9ULD2 1270 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 TRPC6Q9Y210 931 aa19■□□□□ 0.63
HLA-DQB1-204ENST00000399084 IGKV6-21A0A0C4DH24 114 aa18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ASAP2O43150 1006 aa18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 TOM1L1O75674 476 aa18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 UNGP13051 313 aaPredicted RBP18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 KRT5P13647 590 aa18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CTNNA1P35221 906 aaKnown RBP18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ERVK-9P63128 1117 aa18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 HLTFQ14527 1009 aaKnown RBP eCLIP18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 KCTD2Q14681 263 aa18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CELF3Q5SZQ8 465 aaKnown RBP18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CDCA2Q69YH5 1023 aaPredicted RBP18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ZBTB8OSQ8IWT0 167 aa18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ATP8B4Q8TF62 1192 aa18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ZNF653Q96CK0 615 aa18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 NUP85Q9BW27 656 aa18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 DDX47Q9H0S4 455 aaKnown RBP18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 TOPORSQ9NS56 1045 aaPredicted RBP18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CWC15Q9P013 229 aaKnown RBP18.99■□□□□ 0.63
HLA-DQB1-204ENST00000399084 DOCK5Q9H7D0 1870 aa18.98■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CLDN3O15551 220 aa18.98■□□□□ 0.63
HLA-DQB1-204ENST00000399084 PHACTR2O75167 634 aa18.98■□□□□ 0.63
HLA-DQB1-204ENST00000399084 CAPN2P17655 700 aa18.98■□□□□ 0.63
HLA-DQB1-204ENST00000399084 COMTP21964 271 aa18.98■□□□□ 0.63
HLA-DQB1-204ENST00000399084 PIK3CAP42336 1068 aa18.98■□□□□ 0.63
HLA-DQB1-204ENST00000399084 DCAF12L1Q5VU92 463 aa18.98■□□□□ 0.63
HLA-DQB1-204ENST00000399084 ZNF526Q8TF50 670 aaPredicted RBP18.98■□□□□ 0.63
HLA-DQB1-204ENST00000399084 FAXDC2Q96IV6 333 aa18.98■□□□□ 0.63
HLA-DQB1-204ENST00000399084 IMPG2Q9BZV3 1241 aa18.98■□□□□ 0.63
HLA-DQB1-204ENST00000399084 PARP2Q9UGN5 583 aa18.98■□□□□ 0.63
HLA-DQB1-204ENST00000399084 PCYOX1Q9UHG3 505 aa18.98■□□□□ 0.63
HLA-DQB1-204ENST00000399084 TELO2Q9Y4R8 837 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms