RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 PSPC1Q8WXF1 523 aaKnown RBP27.39■■□□□ 1.98
COL13A1-203ENST00000398969 KDM4CQ9H3R0 1056 aa27.39■■□□□ 1.98
COL13A1-203ENST00000398969 RASGRF2O14827 1237 aa27.39■■□□□ 1.98
COL13A1-203ENST00000398969 ASNSP08243 561 aa27.39■■□□□ 1.98
COL13A1-203ENST00000398969 GPC3P51654 580 aa27.39■■□□□ 1.98
COL13A1-203ENST00000398969 TNFAIP1Q13829 316 aa27.39■■□□□ 1.98
COL13A1-203ENST00000398969 C4orf19Q8IY42 314 aa27.39■■□□□ 1.98
COL13A1-203ENST00000398969 DDX1Q92499 740 aaKnown RBP27.39■■□□□ 1.98
COL13A1-203ENST00000398969 TEPSINQ96N21 525 aa27.39■■□□□ 1.98
COL13A1-203ENST00000398969 POP1Q99575 1024 aaKnown RBP27.39■■□□□ 1.98
COL13A1-203ENST00000398969 STMN4Q9H169 189 aaPredicted RBP27.39■■□□□ 1.98
COL13A1-203ENST00000398969 TMEM8AQ9HCN3 771 aa27.39■■□□□ 1.98
COL13A1-203ENST00000398969 INTS9Q9NV88 658 aaKnown RBP27.39■■□□□ 1.98
COL13A1-203ENST00000398969 TBX20Q9UMR3 447 aa27.39■■□□□ 1.98
COL13A1-203ENST00000398969 ASAP2O43150 1006 aa27.38■■□□□ 1.97
COL13A1-203ENST00000398969 AUHQ13825 339 aaKnown RBP27.38■■□□□ 1.97
COL13A1-203ENST00000398969 FAM102BQ5T8I3 360 aa27.38■■□□□ 1.97
COL13A1-203ENST00000398969 TRMT1LQ7Z2T5 733 aaKnown RBP27.38■■□□□ 1.97
COL13A1-203ENST00000398969 SAMD7Q7Z3H4 446 aa27.38■■□□□ 1.97
COL13A1-203ENST00000398969 JPH2Q9BR39 696 aaPredicted RBP27.38■■□□□ 1.97
COL13A1-203ENST00000398969 TBC1D22BQ9NU19 505 aa27.38■■□□□ 1.97
COL13A1-203ENST00000398969 EXOC7Q9UPT5 735 aa27.38■■□□□ 1.97
COL13A1-203ENST00000398969 ZNFX1Q9P2E3 1918 aaKnown RBP27.38■■□□□ 1.97
COL13A1-203ENST00000398969 GHRP10912 638 aa27.38■■□□□ 1.97
COL13A1-203ENST00000398969 SLC17A8Q8NDX2 589 aa27.38■■□□□ 1.97
COL13A1-203ENST00000398969 HVCN1Q96D96 273 aa27.38■■□□□ 1.97
COL13A1-203ENST00000398969 NT5C1BQ96P26 610 aa27.38■■□□□ 1.97
COL13A1-203ENST00000398969 CCDC134Q9H6E4 229 aa27.38■■□□□ 1.97
COL13A1-203ENST00000398969 GJA3Q9Y6H8 435 aa27.38■■□□□ 1.97
COL13A1-203ENST00000398969 UTRNP46939 3433 aa27.38■■□□□ 1.97
COL13A1-203ENST00000398969 CLDN3O15551 220 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 DLATP10515 647 aaKnown RBP27.37■■□□□ 1.97
COL13A1-203ENST00000398969 GHRHRQ02643 423 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 PPP1R7Q15435 360 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 ZNF568Q3ZCX4 644 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 PLA2G4FQ68DD2 849 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 ACAD10Q6JQN1 1059 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 MCF2L2Q86YR7 1114 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 TMEM161BQ8NDZ6 487 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 TAS1R2Q8TE23 839 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 IPO4Q8TEX9 1081 aaKnown RBP27.37■■□□□ 1.97
COL13A1-203ENST00000398969 SLCO2A1Q92959 643 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 TOPORSQ9NS56 1045 aaPredicted RBP27.37■■□□□ 1.97
COL13A1-203ENST00000398969 FSCN2O14926 492 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 GRIN3BO60391 1043 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 CALCOCO2Q13137 446 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 MFSD5Q6N075 450 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 PIGWQ7Z7B1 504 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 CCDC25Q86WR0 208 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 MAP4K3Q8IVH8 894 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 LRRC34Q8IZ02 419 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 DHX38Q92620 1227 aaKnown RBP27.37■■□□□ 1.97
COL13A1-203ENST00000398969 PRMT1Q99873 361 aaKnown RBP27.37■■□□□ 1.97
COL13A1-203ENST00000398969 KIFC3Q9BVG8 833 aa27.37■■□□□ 1.97
COL13A1-203ENST00000398969 TP73O15350 636 aa27.36■■□□□ 1.97
COL13A1-203ENST00000398969 ATP2C2O75185 946 aa27.36■■□□□ 1.97
COL13A1-203ENST00000398969 CNGA1P29973 690 aa27.36■■□□□ 1.97
COL13A1-203ENST00000398969 XKR9Q5GH70 373 aa27.36■■□□□ 1.97
COL13A1-203ENST00000398969 TRMT10CQ7L0Y3 403 aaKnown RBP27.36■■□□□ 1.97
COL13A1-203ENST00000398969 FBXL13Q8NEE6 735 aa27.36■■□□□ 1.97
COL13A1-203ENST00000398969 KIFAP3Q92845 792 aa27.36■■□□□ 1.97
COL13A1-203ENST00000398969 HAUS2Q9NVX0 235 aa27.36■■□□□ 1.97
COL13A1-203ENST00000398969 CCT8L1PA6NM43 557 aa27.36■■□□□ 1.97
COL13A1-203ENST00000398969 PSMC5P62195 406 aa27.36■■□□□ 1.97
COL13A1-203ENST00000398969 LLGL1Q15334 1064 aa27.36■■□□□ 1.97
COL13A1-203ENST00000398969 FUKQ8N0W3 1084 aa27.36■■□□□ 1.97
COL13A1-203ENST00000398969 NLGN2Q8NFZ4 835 aa27.36■■□□□ 1.97
COL13A1-203ENST00000398969 SYTL5Q8TDW5 730 aaPredicted RBP27.36■■□□□ 1.97
COL13A1-203ENST00000398969 C1orf54Q8WWF1 131 aa27.36■■□□□ 1.97
COL13A1-203ENST00000398969 RAB20Q9NX57 234 aa27.36■■□□□ 1.97
COL13A1-203ENST00000398969 NPTX2P47972 431 aa27.35■■□□□ 1.97
COL13A1-203ENST00000398969 ANKS4BQ8N8V4 417 aa27.35■■□□□ 1.97
COL13A1-203ENST00000398969 ELMO3Q96BJ8 720 aa27.35■■□□□ 1.97
COL13A1-203ENST00000398969 ROPN1BQ9BZX4 212 aaPredicted RBP27.35■■□□□ 1.97
COL13A1-203ENST00000398969 CDC42EP4Q9H3Q1 356 aaKnown RBP27.35■■□□□ 1.97
COL13A1-203ENST00000398969 ROPN1Q9HAT0 212 aaPredicted RBP27.35■■□□□ 1.97
COL13A1-203ENST00000398969 A1CFQ9NQ94 594 aaKnown RBP27.35■■□□□ 1.97
COL13A1-203ENST00000398969 AAASQ9NRG9 546 aa27.35■■□□□ 1.97
COL13A1-203ENST00000398969 WHRNQ9P202 907 aa27.35■■□□□ 1.97
COL13A1-203ENST00000398969 KRT17Q04695 432 aa27.34■■□□□ 1.97
COL13A1-203ENST00000398969 ITIH4Q14624 930 aa27.34■■□□□ 1.97
COL13A1-203ENST00000398969 CLEC16AQ2KHT3 1053 aa27.34■■□□□ 1.97
COL13A1-203ENST00000398969 SGO2Q562F6 1265 aa27.34■■□□□ 1.97
COL13A1-203ENST00000398969 CYB5D1Q6P9G0 228 aa27.34■■□□□ 1.97
COL13A1-203ENST00000398969 TAX1BP1Q86VP1 789 aa27.34■■□□□ 1.97
COL13A1-203ENST00000398969 TMC2Q8TDI7 906 aa27.34■■□□□ 1.97
COL13A1-203ENST00000398969 PLVAPQ9BX97 442 aa27.34■■□□□ 1.97
COL13A1-203ENST00000398969 CD248Q9HCU0 757 aa27.34■■□□□ 1.97
COL13A1-203ENST00000398969 EIF2AK2P19525 551 aaKnown RBP27.34■■□□□ 1.97
COL13A1-203ENST00000398969 TAOK1Q7L7X3 1001 aa27.34■■□□□ 1.97
COL13A1-203ENST00000398969 CPXCR1Q8N123 301 aa27.34■■□□□ 1.97
COL13A1-203ENST00000398969 MFSD14AQ96MC6 490 aa27.34■■□□□ 1.97
COL13A1-203ENST00000398969 DDX23Q9BUQ8 820 aaKnown RBP27.34■■□□□ 1.97
COL13A1-203ENST00000398969 ANKEF1Q9NU02 776 aa27.34■■□□□ 1.97
COL13A1-203ENST00000398969 ATP9AO75110 1047 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 CCNE2O96020 404 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 XRCC4Q13426 336 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 MKRN4PQ13434 485 aaPredicted RBP27.33■■□□□ 1.97
COL13A1-203ENST00000398969 CNGA2Q16280 664 aa27.33■■□□□ 1.97
COL13A1-203ENST00000398969 CCDC38Q502W7 563 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms