RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 EFNA5P52803 228 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 POU5F1BQ06416 359 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 GLE1Q53GS7 698 aaKnown RBP15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 SGMS1Q86VZ5 419 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 RHOT2Q8IXI1 618 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 SNX24Q9Y343 169 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 STAG3L1P0CL83 205 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 TRAIPQ9BWF2 469 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 COG4Q9H9E3 785 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 EPB41L4AQ9HCS5 686 aaPredicted RBP15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 RBAKQ9NYW8 714 aaPredicted RBP15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 A0A0G2JND7 137 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 PGK2P07205 417 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 VAMP7P51809 220 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 PTK2BQ14289 1009 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 KLHL29Q96CT2 875 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 ZBTB18Q99592 522 aa15.1■□□□□ 0.01
PCDHA11-201ENST00000398640 UBA6A0AVT1 1052 aaPredicted RBP15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 TDP2O95551 362 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 SUPT20HL2P0C7V6 817 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 GNA15P30679 374 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 TMPRSS15P98073 1019 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 ZNF513Q8N8E2 541 aaPredicted RBP15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 RNF208Q9H0X6 261 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 SUFUQ9UMX1 484 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 TMEM247A6NEH6 219 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 PRKCBP05771 671 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 OR1G1P47890 313 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 TMEM143Q96AN5 459 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 RMDN1Q96DB5 314 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 CYTH2Q99418 400 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 LRRC53A6NM62 1247 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 MAFGO15525 162 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 KPNA6O60684 536 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 ESRRAP11474 423 aaPredicted RBP15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 FGFR2P21802 821 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 SDC4P31431 198 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 THPOP40225 353 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 PSMC1P62191 440 aaKnown RBP15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 ZNF211Q13398 564 aaPredicted RBP15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 LBRQ14739 615 aaKnown RBP15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 RNF135Q8IUD6 432 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 CCDC124Q96CT7 223 aaKnown RBP15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 EGFL8Q99944 293 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 NUP85Q9BW27 656 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 TUFT1Q9NNX1 390 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 COPEO14579 308 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 NCK2O43639 380 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 RAD51Q06609 339 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 PDCD2Q16342 344 aaPredicted RBP15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 TAAR1Q96RJ0 339 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 STAP1Q9ULZ2 295 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 PRCPP42785 496 aa15.09■□□□□ 0.01
PCDHA11-201ENST00000398640 HSPA8P11142 646 aaKnown RBP15.08■□□□□ 0.01
PCDHA11-201ENST00000398640 KCNH2Q12809 1159 aa15.08■□□□□ 0.01
PCDHA11-201ENST00000398640 RASSF3Q86WH2 238 aa15.08■□□□□ 0.01
PCDHA11-201ENST00000398640 PANX2Q96RD6 677 aa15.08■□□□□ 0.01
PCDHA11-201ENST00000398640 MID2Q9UJV3 735 aa15.08■□□□□ 0.01
PCDHA11-201ENST00000398640 HBP1O60381 514 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 MFAP3LO75121 409 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 ZRANB2O95218 330 aaKnown RBP eCLIP15.08■□□□□ 0
PCDHA11-201ENST00000398640 SERPIND1P05546 499 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 ARL4CP56559 192 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 GPC5P78333 572 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 SP3Q02447 781 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 KRT17Q04695 432 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 CRLF3Q8IUI8 442 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 ZNF560Q96MR9 790 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 SRPK1Q96SB4 655 aaKnown RBP15.08■□□□□ 0
PCDHA11-201ENST00000398640 SUN2Q9UH99 717 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 VGLL4Q14135 290 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 EFHC2Q5JST6 749 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 SRRM1Q8IYB3 904 aaKnown RBP15.08■□□□□ 0
PCDHA11-201ENST00000398640 EXOC4Q96A65 974 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 FBXO28Q9NVF7 368 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 VCPP55072 806 aaKnown RBP15.08■□□□□ 0
PCDHA11-201ENST00000398640 KRT80Q6KB66 452 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 REM2Q8IYK8 340 aaPredicted RBP15.08■□□□□ 0
PCDHA11-201ENST00000398640 SPATC1LQ9H0A9 340 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 ABCB6Q9NP58 842 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 RNF14Q9UBS8 474 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 STXBP3O00186 592 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 SYF2O95926 243 aaKnown RBP15.08■□□□□ 0
PCDHA11-201ENST00000398640 ZNF235Q14590 738 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 MGAT5BQ3V5L5 792 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 ULK4Q96C45 1275 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 RBM41Q96IZ5 413 aaKnown RBP15.08■□□□□ 0
PCDHA11-201ENST00000398640 JMJD4Q9H9V9 463 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 CEP72Q9P209 647 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 LSM7Q9UK45 103 aaKnown RBP15.08■□□□□ 0
PCDHA11-201ENST00000398640 TMX2Q9Y320 296 aa15.08■□□□□ 0
PCDHA11-201ENST00000398640 PDS5AQ29RF7 1337 aaKnown RBP15.07■□□□□ 0
PCDHA11-201ENST00000398640 NKRFO15226 690 aaKnown RBP eCLIP15.07■□□□□ 0
PCDHA11-201ENST00000398640 RPS6P62753 249 aaKnown RBP15.07■□□□□ 0
PCDHA11-201ENST00000398640 GIPC2Q8TF65 315 aa15.07■□□□□ 0
PCDHA11-201ENST00000398640 MXRA8Q9BRK3 442 aa15.07■□□□□ 0
PCDHA11-201ENST00000398640 AGO2Q9UKV8 859 aaKnown RBP15.07■□□□□ 0
PCDHA11-201ENST00000398640 PLAAQ9Y263 795 aa15.07■□□□□ 0
PCDHA11-201ENST00000398640 AK9Q5TCS8 1911 aa15.07■□□□□ 0
PCDHA11-201ENST00000398640 ITGA4P13612 1032 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms